DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2Av and HTA12

DIOPT Version :10

Sequence 1:NP_524519.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001190208.1 Gene:HTA12 / 831891 AraportID:AT5G02560 Length:177 Species:Arabidopsis thaliana


Alignment Length:157 Identity:76/157 - (48%)
Similarity:93/157 - (59%) Gaps:31/157 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKAGKDSGKA-KAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAE-- 65
            |.||:.||.. |.|.||||.::|||||||||.|:||....|. |||..|.||.||:||||.||  
plant    10 GAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSK-RVGTGAPVYLAAVLEYLAAENS 73

  Fly    66 ----------------------VLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAG 107
                                  ||||||||::|.|..||.|||:.||:|.||||.:|:| .|||.
plant    74 CGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAH 138

  Fly   108 GGVIPHIHKSLIGKKEE----TVQDPQ 130
            |||:|:|:..|:.||.|    |.:.|:
plant   139 GGVLPNINPILLPKKSEKAASTTKTPK 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_524519.1 PLN00154 6..121 CDD:177756 70/140 (50%)
HTA12NP_001190208.1 PLN00157 20..164 CDD:177758 70/144 (49%)

Return to query results.
Submit another query.