DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2Av and H2ac4

DIOPT Version :10

Sequence 1:NP_524519.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001102893.1 Gene:H2ac4 / 680615 RGDID:1589461 Length:130 Species:Rattus norvegicus


Alignment Length:120 Identity:77/120 - (64%)
Similarity:93/120 - (77%) Gaps:2/120 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 71
            ||..|||:|||.:||:||||||||||:||.|:....|. ||||.|.||.||:|||||||:|||||
  Rat     5 GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAG 68

  Fly    72 NASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKEET 125
            ||::|.|..||.|||||||||.||||:.|: :.|||.|||:|:|...|:.||.|:
  Rat    69 NAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTES 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_524519.1 PLN00154 6..121 CDD:177756 74/114 (65%)
H2ac4NP_001102893.1 PTZ00017 1..130 CDD:185399 77/120 (64%)

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