DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2Av and macroh2a2

DIOPT Version :9

Sequence 1:NP_001262997.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001006925.1 Gene:macroh2a2 / 448772 XenbaseID:XB-GENE-1015564 Length:372 Species:Xenopus tropicalis


Alignment Length:130 Identity:70/130 - (53%)
Similarity:89/130 - (68%) Gaps:7/130 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 75
            ||.|...:|||||||:.|||||:.|:|: |.|...|:|..|.||.||::|||.||:|||||||::
 Frog     6 GKKKTTKLSRSARAGVIFPVGRMMRYLR-RGTHKYRIGMGAPVYMAAVIEYLAAEILELAGNAAR 69

  Fly    76 DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKEETVQDPQRKGNVILSQ 139
            |.|..||||||:.||:..||||:.|:: .|||.|||:|.||..|:.||..:     |....||||
 Frog    70 DNKKGRITPRHILLAVANDEELNQLLRGVTIASGGVLPRIHPELLAKKRGS-----RGKETILSQ 129

  Fly   140  139
             Frog   130  129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_001262997.1 PLN00154 6..121 CDD:177756 63/110 (57%)
macroh2a2NP_001006925.1 H2A 5..117 CDD:238029 63/111 (57%)
Macro_H2A_like 178..364 CDD:239232
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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