DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2Av and h2ax

DIOPT Version :10

Sequence 1:NP_524519.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_957367.1 Gene:h2ax / 394048 ZFINID:ZDB-GENE-040426-987 Length:142 Species:Danio rerio


Alignment Length:123 Identity:76/123 - (61%)
Similarity:93/123 - (75%) Gaps:4/123 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGGKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAE 65
            |:|  .||..|||:|||.:||:||||||||||:||.|:....:. ||||.|.||.||:|||||||
Zfish     1 MSG--RGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAE 62

  Fly    66 VLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
            :|||||||::|.|..||.|||||||:|.||||:.|: ..|||.|||:|:|...|:.||
Zfish    63 ILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_524519.1 PLN00154 6..121 CDD:177756 72/115 (63%)
h2axNP_957367.1 PTZ00017 1..121 CDD:185399 76/123 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 12/22 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..142
[ST]-Q motif 139..140
Blue background indicates that the domain is not in the aligned region.

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