DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2Av and h2ax

DIOPT Version :9

Sequence 1:NP_001262997.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_957367.1 Gene:h2ax / 394048 ZFINID:ZDB-GENE-040426-987 Length:142 Species:Danio rerio


Alignment Length:123 Identity:76/123 - (61%)
Similarity:93/123 - (75%) Gaps:4/123 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGGKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAE 65
            |:|  .||..|||:|||.:||:||||||||||:||.|:....:. ||||.|.||.||:|||||||
Zfish     1 MSG--RGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAE 62

  Fly    66 VLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
            :|||||||::|.|..||.|||||||:|.||||:.|: ..|||.|||:|:|...|:.||
Zfish    63 ILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_001262997.1 PLN00154 6..121 CDD:177756 72/115 (63%)
h2axNP_957367.1 PTZ00017 1..121 CDD:185399 76/123 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 12/22 (55%)
H2A 6..120 CDD:238029 71/114 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..142
[ST]-Q motif 139..140
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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