DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2Av and H2aj

DIOPT Version :10

Sequence 1:NP_524519.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_808356.1 Gene:H2aj / 232440 MGIID:3606192 Length:129 Species:Mus musculus


Alignment Length:126 Identity:78/126 - (61%)
Similarity:95/126 - (75%) Gaps:4/126 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGGKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAE 65
            |:|  .||..||.:|||.|||:||||||||||:||.|:....:. ||||.|.||.||:|||||||
Mouse     1 MSG--RGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAE 62

  Fly    66 VLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKEET 125
            :|||||||::|.|..||.|||||||||.||||:.|: :.|||.|||:|:|...|:.||.|:
Mouse    63 ILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTES 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_524519.1 PLN00154 6..121 CDD:177756 73/115 (63%)
H2ajNP_808356.1 PTZ00017 1..129 CDD:185399 78/126 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 12/22 (55%)

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