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Protein Alignment His2Av and h2ac17
DIOPT Version :9
Sequence 1: | NP_001262997.1 |
Gene: | His2Av / 43229 |
FlyBaseID: | FBgn0001197 |
Length: | 141 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012811817.1 |
Gene: | h2ac17 / 100127770 |
XenbaseID: | XB-GENE-5861673 |
Length: | 156 |
Species: | Xenopus tropicalis |
Alignment Length: | 134 |
Identity: | 71/134 - (52%) |
Similarity: | 92/134 - (68%) |
Gaps: | 7/134 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAGGKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAE 65
|:| .||...||.:...||||:||||||||||||.|:....:. |:|:.:|:|.||.||||.||
Frog 19 MSG--RGKKVQKAASGKSSRSAKAGLQFPVGRIHRLLRKGNYAE-RIGSGSAIYLAATLEYLCAE 80
Fly 66 VLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKE---ETV 126
||||||||::|.|..||.|||:|||:|.|:||..|.. .|||.|||:|:|..:|:.||. .:.
Frog 81 VLELAGNAARDNKKSRILPRHIQLAVRNDDELAKLFDGVTIADGGVLPNIQSALLPKKTVKGSSS 145
Fly 127 QDPQ 130
|:|:
Frog 146 QEPK 149
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
His2Av | NP_001262997.1 |
PLN00154 |
6..121 |
CDD:177756 |
65/115 (57%) |
h2ac17 | XP_012811817.1 |
H2A |
24..138 |
CDD:238029 |
64/114 (56%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53554 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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