DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2Av and H2al1f

DIOPT Version :10

Sequence 1:NP_524519.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001229880.1 Gene:H2al1f / 100042939 MGIID:3649874 Length:105 Species:Mus musculus


Alignment Length:84 Identity:29/84 - (34%)
Similarity:49/84 - (58%) Gaps:3/84 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 83
            :||.|..|.|.:  :.|.|:....| .|:.::|..:..::|||||:.:|||||..::....|||.
Mouse    14 TRSQRGELPFSL--VDRFLREEFHS-SRLSSSALSFLTSVLEYLTSNILELAGEVAQTTGRKRIA 75

  Fly    84 PRHLQLAIRGDEELDSLIK 102
            |..::|.::.:|:|..|.|
Mouse    76 PEDVRLVVQNNEQLRQLFK 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_524519.1 PLN00154 6..121 CDD:177756 29/84 (35%)
H2al1fNP_001229880.1 HFD_SF <50..94 CDD:480273 18/43 (42%)

Return to query results.
Submit another query.