DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2Av and H2al2b

DIOPT Version :9

Sequence 1:NP_001262997.1 Gene:His2Av / 43229 FlyBaseID:FBgn0001197 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001106866.1 Gene:H2al2b / 100042840 MGIID:3710623 Length:111 Species:Mus musculus


Alignment Length:95 Identity:34/95 - (35%)
Similarity:52/95 - (54%) Gaps:1/95 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 72
            :.|.:.:...::.|.||.|||||.|:.|.|.....|. |:.::|.|:...:|||||..:|.|||.
Mouse     3 RKSQRRRRWKITHSQRAELQFPVSRVDRFLGEGIYSR-RLSSSALVFLVGVLEYLTPNILGLAGE 66

  Fly    73 ASKDLKVKRITPRHLQLAIRGDEELDSLIK 102
            .:....:|||.|.|:...::..|:|..|.|
Mouse    67 VTHTSGMKRIAPEHVCQVVQNKEQLHQLFK 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2AvNP_001262997.1 PLN00154 6..121 CDD:177756 34/95 (36%)
H2al2bNP_001106866.1 H2A 12..99 CDD:305064 33/86 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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