DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ball and VHS1

DIOPT Version :9

Sequence 1:NP_651508.1 Gene:ball / 43228 FlyBaseID:FBgn0027889 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_010533.1 Gene:VHS1 / 851834 SGDID:S000002655 Length:461 Species:Saccharomyces cerevisiae


Alignment Length:423 Identity:96/423 - (22%)
Similarity:157/423 - (37%) Gaps:88/423 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VFTDLAKGQWRIGPSIGVGGFGEIYAACKV-GEKNY--DAVVKC------------EPHGN---- 83
            :|.:.....:.|...||.|.:|.:|.|..: .::.|  .|||:.            :.|.|    
Yeast     3 MFHNCRINNYLITSQIGEGAYGLVYRALDIRTDRQYAIKAVVQSYGVSKEADMGNDKIHKNSVKL 67

  Fly    84 ----GPLFVEMHFYLR--NAKLEDIKQFMQKHGLKSLGMPYILANGSVEVNGEKHR--------- 133
                ..||.|....:|  :..||.|:. |.:...|.|  |: ....|:.:....|:         
Yeast    68 QKKLAKLFKESKNVVRVPSIDLESIEN-MSEEDFKKL--PH-YKEISLHLRVHHHKNIVTIHEVL 128

  Fly   134 ------FIVMPRYGSDLTKFLEQNGKRLPEG-TVYRLAIQMLDVYQYMHSNGYVHADLKAANILL 191
                  ||||..|.:||...:..|...:..| .|.::.:|:.....|.|.:|..|.|:|..|:||
Yeast   129 QSAVCTFIVMDYYPTDLFTSIVDNRHFVTNGLLVKKVFLQICSALNYCHEHGIYHCDIKPENLLL 193

  Fly   192 GLEKGGAAQAYLVDFGLA--SHFV-------TGDFKPDPKKMHNGTIEYTSRDAH-LG--VPTRR 244
            ..|.    ..:|.||||:  |.::       :..:.|..:...:|.:..:....| ||  .|:..
Yeast   194 DTED----NVFLCDFGLSTTSTYIKPNVCIGSSYYMPPERISFDGRVSSSKSGGHKLGKVCPSCN 254

  Fly   245 ADLEILGYNLIEWLGAELPWV--------TQKLLAVPPKVQKAKEAFMDNIGESLKTLF---PKG 298
            .||..||..||.......||:        |.......|.:.|......|:....|..:.   ||.
Yeast   255 GDLWSLGIILINLTCIRNPWLKADKTEDNTYYYFTKDPNILKQILPLSDDFYSLLSKILQVNPKN 319

  Fly   299 VPPPIGDFMKYVSKLTHNQEPDYDKCRSWFSSALKQLKIP--NNGDLDFKMKPQTSSNNNLSPPG 361
             ...:.:.||.||.:|.            |::.....|:|  :....:..:.|..::|.||||..
Yeast   320 -RMSLQELMKEVSSITS------------FTNEGPLSKVPPLSKSVYEKFVSPVDNTNENLSPKS 371

  Fly   362 TSKAATARKAKKIDSPVLNSSLDEKISASEDDE 394
            ......::.||.: |...:|..::.|....||:
Yeast   372 YVYMHDSKAAKNL-SYTSSSEEEDGIKEGIDDD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ballNP_651508.1 STKc_VRK 36..328 CDD:270917 80/353 (23%)
SPS1 47..432 CDD:223589 95/414 (23%)
Pol_alpha_B_N <399..>502 CDD:285602
VHS1NP_010533.1 STKc_Pat1_like 11..330 CDD:270895 76/327 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2828
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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