DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS12 and ints12

DIOPT Version :9

Sequence 1:NP_651507.1 Gene:IntS12 / 43227 FlyBaseID:FBgn0039459 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_012820598.1 Gene:ints12 / 779778 XenbaseID:XB-GENE-977203 Length:470 Species:Xenopus tropicalis


Alignment Length:375 Identity:101/375 - (26%)
Similarity:162/375 - (43%) Gaps:85/375 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAAAAAAAQEVDPVLKKAIKLLHSSNPTSAAELRLLLDEAL----KARFGPE-------KSLTNN 58
            |..|.....|:|||..||:..|||.:..||.:|:.||||:|    .:.:.|:       |::.:.
 Frog     3 ITMAVTINTELDPVFLKALGYLHSKSKDSAEKLKALLDESLCKGNDSVYRPQPKEMEQPKAMLSK 67

  Fly    59 MTPRMLEDEANFSGRAATPPQQPINAD----------------EIINLTNSPDK------EPSDS 101
            :.|   |.:|:.|..:::...:|:.::                ||.::.:.|.|      |...|
 Frog    68 VKP---ETKASSSTPSSSMLSKPLTSEKLKKEAEKRSADKMKVEISDVMDIPKKPRIEKTEARSS 129

  Fly   102 VDTIADSDD----GLSAVGIVNTGDTGDFGDLNCCVCGEMVFTATNRLIECSKCGAMYHQECHKP 162
            ..|:..|.|    .||:....:..|......|.|.||.:|...:.|:|:||.:|..:|||:||||
 Frog   130 PVTVQLSKDLPVPDLSSFDETSADDFAMEMGLACVVCRQMTVFSGNQLVECQECHNLYHQDCHKP 194

  Fly   163 PITKEEAADDQEQNWQCDTCC---------NKPTSSGRTTSSAAAVTPTVFIADEPMPLTSKAKS 218
            .:|.:: .:|....|.|..|.         |:..|...:.|:.:||||   :|.:|.....:.|:
 Frog   195 QVTDKD-VNDPRLVWYCARCTRQMKRMAQKNQKPSQKPSPSAVSAVTP---VAKDPSVNKPELKA 255

  Fly   219 SVASSRSSNSSNSSSPFYRPEPSSSTNASSSSSSKHGHKSSSSSSSK------------------ 265
                  ..:|:|:...|.|.|..:| :|.|||||..|..|||:|...                  
 Frog   256 ------KPDSANTFLAFKRAEVKAS-SAVSSSSSNSGVSSSSASGLTGWAAFGAKTANAVPVLGK 313

  Fly   266 --SHKEERSSKSTAASSLSAIGGMEKHNSSGTSSRRSGSSTKSSSKSSSS 313
              :..:..|.|..:.||:...|.     :.|.:..:.||.:||.|..|||
 Frog   314 LGTSSQATSGKPPSLSSVQKTGA-----APGLAPSKPGSISKSGSGGSSS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS12NP_651507.1 PHD_Int12 130..182 CDD:276976 20/51 (39%)
ints12XP_012820598.1 PHD_Int12 162..213 CDD:276976 20/51 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10845
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 98 1.000 Inparanoid score I4887
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1631937at2759
OrthoFinder 1 1.000 - - FOG0006596
OrthoInspector 1 1.000 - - otm48601
Panther 1 1.100 - - LDO PTHR13415
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3479
SonicParanoid 1 1.000 - - X5595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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