DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS12 and Pcl

DIOPT Version :9

Sequence 1:NP_651507.1 Gene:IntS12 / 43227 FlyBaseID:FBgn0039459 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001261067.1 Gene:Pcl / 37069 FlyBaseID:FBgn0003044 Length:1043 Species:Drosophila melanogaster


Alignment Length:366 Identity:69/366 - (18%)
Similarity:119/366 - (32%) Gaps:115/366 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ARFGPEKSLTNNMTPRMLEDEANFSGRAATPPQQ-------PINADEIINLTNSP-----DKEPS 99
            |..||:  .|:...|..::...:|: :.:|||:|       |..|:.|..::.:|     :|.|.
  Fly    73 ATTGPQ--TTHPTHPSTIQITNSFA-QQSTPPKQQAATSCSPFKANNIRIISTAPSVYSLNKPPQ 134

  Fly   100 DSVDTIA-------DSDDGLSA--VGIVNTGDTGD---------------------FGDLNCCVC 134
            ::..|.|       .|..|.:|  :.::....||.                     ...:|.|:.
  Fly   135 EAHSTYAPVQSYYLPSGGGQTAGQINLLAASGTGKQLQPPPLVPVTNSTSPPSTVVLDRINICIN 199

  Fly   135 GEMVFTAT---NRLIECSKCGAMYHQECHKP--PITKEEAADDQEQNWQCDTCCNKPTSSGRTTS 194
            .....|.|   :.|....:...:.....||.  |:.....||        .:.|:..:.|..:.|
  Fly   200 NHYTETPTSLSSSLTTAQQPSPIIPAIQHKAILPLIDSSTAD--------SSSCSSSSVSSSSYS 256

  Fly   195 SAAAVTPTVFIADEP---------MPLTSKAKSSVASSRSS----------NSSNSSSPFYR--- 237
            ..|..:..|.|.|||         .|.|.:|.||...|..|          ...||..|.::   
  Fly   257 GTATTSAAVVIVDEPDSTTTTPQTPPTTPEAMSSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVE 321

  Fly   238 -------------PEPSSSTNASSSSSSKHGHK------------------SSSSSSSKSHKEER 271
                         |.|.:...|:.|.:..:..:                  ..:|.......:::
  Fly   322 AAPPTPPTPPSPPPPPPAPPVAAPSPAVTYALQEDVFIKCNDGRFYLGTIIDQTSDQYLIRFDDQ 386

  Fly   272 SSKSTAASSLSAIGGMEKHNSSGTSSRRSGSSTKSSSKSSS 312
            |.:......|..:||    .||.|:.....|:|:|::.|.|
  Fly   387 SEQWCEPDKLRKLGG----GSSITAGGGGASTTESTNTSPS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS12NP_651507.1 PHD_Int12 130..182 CDD:276976 10/56 (18%)
PclNP_001261067.1 TUDOR 350..399 CDD:197660 3/48 (6%)
PHD_SF 426..469 CDD:304600
PHD2_MTF2_PHF19_like 514..565 CDD:276978
Mtf2_C 985..1032 CDD:290768
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4323
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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