DRSC/TRiP Functional Genomics Resources

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Protein Alignment IntS12 and Ints12

DIOPT Version :9

Sequence 1:NP_651507.1 Gene:IntS12 / 43227 FlyBaseID:FBgn0039459 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_006233382.1 Gene:Ints12 / 295448 RGDID:1359136 Length:467 Species:Rattus norvegicus


Alignment Length:376 Identity:101/376 - (26%)
Similarity:153/376 - (40%) Gaps:78/376 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAAAAAAAQEVDPVLKKAIKLLHSSNPTSAAELRLLLDEAL----KARFGP------------EK 53
            :|.||....|:||:..||:..|||.:..||.:|:.||||:|    .|.:.|            .|
  Rat     5 LAMAATVNLELDPIFLKALGFLHSKSKDSAEKLKTLLDESLARGIDASYRPAQKDVEPPKISSTK 69

  Fly    54 SLTNNMTPR------------------MLEDEANFSGRAATPPQQPINADEIINLTNSP---DKE 97
            ||:....|:                  .|:.||.     ..|..:..:|.|.:::...|   ..|
  Rat    70 SLSIKQEPKTSSSLPSGSSNGKVLAAEKLKKEAE-----KRPADKMKDATEGVDVPKKPRLEKPE 129

  Fly    98 PSDSVDTIADSDDGLSAVGIVNTGDTG--DFG---DLNCCVCGEMVFTATNRLIECSKCGAMYHQ 157
            ...|..|:..|.| |:...:.:..:|.  ||.   .|.|.||.:|...:.|:|:||.:|..:|||
  Rat   130 TRSSPITVQTSKD-LAMADLSSFEETSADDFAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQ 193

  Fly   158 ECHKPPITKEEAADDQEQNWQCDTCCNKPTSSGRTTS--------SAAAVTPTVFIADEPMPLTS 214
            :||||.:|.:| .:|....|.|..|..:.....:.|.        :..:|.|||     ..||..
  Rat   194 DCHKPQVTDKE-VNDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPTVVSVAPTV-----KDPLVK 252

  Fly   215 KAKSSVASSRSSNSSNSSSPFYRPEPSSSTNASSSSSSKHGHKSSSSSSSKSHKEERSSKSTAAS 279
            |.::.:      ....:...|.|.|...||..|.:|||  .:.|||.:|..:.....::|:::|.
  Rat   253 KPETKL------KQETTFLAFKRTEVKPSTVISGNSSS--NNVSSSVTSGLTGWAAFAAKTSSAG 309

  Fly   280 SLSAIGGMEKHNSSGTSSRRSGSS--------TKSSSKSSSSKHHESGSSS 322
            ..:|.......||||..:..|.|.        ..||.....||...|.|:|
  Rat   310 PSTAKLNSTAQNSSGKPAASSASQKPVGLTGLATSSKGGIGSKIGSSNSTS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS12NP_651507.1 PHD_Int12 130..182 CDD:276976 21/51 (41%)
Ints12XP_006233382.1 PHD_Int12 166..217 CDD:276976 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334424
Domainoid 1 1.000 57 1.000 Domainoid score I10660
eggNOG 1 0.900 - - E1_KOG4323
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 89 1.000 Inparanoid score I5038
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1631937at2759
OrthoFinder 1 1.000 - - FOG0006596
OrthoInspector 1 1.000 - - oto97219
orthoMCL 1 0.900 - - OOG6_107743
Panther 1 1.100 - - LDO PTHR13415
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

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