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Protein Alignment IntS12 and Phf1
DIOPT Version :9
Sequence 1: | NP_651507.1 |
Gene: | IntS12 / 43227 |
FlyBaseID: | FBgn0039459 |
Length: | 328 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017457076.1 |
Gene: | Phf1 / 294287 |
RGDID: | 1303205 |
Length: | 624 |
Species: | Rattus norvegicus |
Alignment Length: | 154 |
Identity: | 39/154 - (25%) |
Similarity: | 55/154 - (35%) |
Gaps: | 35/154 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 61 PRMLEDEANFSGRAATPPQQPINADEIIN-----LTNSPDKEPSDSVDTIADSDDGLSAVGIVNT 120
|.:||:.......|..|....:.|..:.: .|:.|.....:..|.:|...|||..:|.:..
Rat 53 PGLLENSPPQDAMAQLPRLSRLGAPSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKK 117
Fly 121 GDTG------DFGD--------------------LNCCVCGEMVFTATNRLIECSKCGAMYHQEC 159
.|:. .|.| |.||||........|||:.|.||...|||:|
Rat 118 VDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDC 182
Fly 160 HKPPITKEEAADDQE-QNWQCDTC 182
|.| :..|..:.| .:|.|..|
Rat 183 HVP---RAPAPGEGEGSSWVCRQC 203
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
IntS12 | NP_651507.1 |
PHD_Int12 |
130..182 |
CDD:276976 |
20/52 (38%) |
Phf1 | XP_017457076.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4323 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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