DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lerp and MRL1

DIOPT Version :10

Sequence 1:NP_001262996.1 Gene:Lerp / 43223 FlyBaseID:FBgn0051072 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_015404.1 Gene:MRL1 / 856194 SGDID:S000006283 Length:381 Species:Saccharomyces cerevisiae


Alignment Length:274 Identity:57/274 - (20%)
Similarity:101/274 - (36%) Gaps:76/274 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 ANEVCSFYISYRTPLACLSIPEGLQSNS-----CRVGDTKSNGTFDLMPLSD------------- 222
            |||..:.:...||    |:.|:..:|.:     |.|.:..:....||..||.             
Yeast    34 ANEHRASHKQKRT----LANPDKPKSENDEDLFCAVTNPVTGSYIDLSQLSSTPNKLREGQKQIS 94

  Fly   223 -SNYHTSNR---------QGAFFVINVC-KPVLYGENSMCPAGSSVCLFDSKATNPKERFINFGN 276
             :|.|.|::         ....|.:.:| .||...|:......:.....|....|   ..::.|:
Yeast    95 GNNKHESSKTKWSVRGWGYDTNFTLGICSSPVGEAESQQLSNLTGAFYVDQLNEN---NLVSIGD 156

  Fly   277 VQTHPVVEKG----QLLLRHESPTPCAKNSSANYTSVIYFSCDKFIRN-AHPEFAGLGADSCTYQ 336
            ..|.|.:..|    :|.|::|:.:.| .|......:::.|.|||.|:: |...:.| ...:|:|.
Yeast   157 FSTRPALVGGSTAKKLTLKYENGSMC-PNGKDKKATLLNFVCDKEIQSKAQISYIG-NLHNCSYF 219

  Fly   337 FNFATPLAC------NDLKPCTAF--------------------------TSTNELLDLS-SLSS 368
            |...:..||      |::.....|                          .:.:||.|:| ||:.
Yeast   220 FEVRSIHACPTSNKKNEVNVLGIFIGIFAIFFLVEFAGRRWIYAKLNRHLKNDDELHDISPSLNE 284

  Fly   369 KPARTLLKDGKNYT 382
            :|...|::||..::
Yeast   285 QPHWDLIEDGSRWS 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LerpNP_001262996.1 CIMR <49..143 CDD:425923
CIMR 157..298 CDD:425923 31/154 (20%)
CIMR 307..435 CDD:425923 24/110 (22%)
CIMR 445..>574 CDD:425923
CIMR 623..>666 CDD:425923
MRL1NP_015404.1 None
Blue background indicates that the domain is not in the aligned region.

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