DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and RLP53

DIOPT Version :9

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001332753.1 Gene:RLP53 / 832764 AraportID:AT5G27060 Length:958 Species:Arabidopsis thaliana


Alignment Length:956 Identity:212/956 - (22%)
Similarity:343/956 - (35%) Gaps:282/956 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PGHTPIASILDYLGIVSPTTLIFESDNLGMN--------ITRQ-------HLD----RLHGLKRF 155
            |.|..|      .||.||.    ::|:.|.|        :|..       .||    .|||    
plant    60 PDHCKI------YGIESPR----KTDSWGNNSDCCNWEGVTCNAKSGEVIELDLSCSSLHG---- 110

  Fly   156 RFTTRRLTHIPANLLTDMRNLSHL-ELRANIEEMPSHLFDDLENLES---IEFGSNKLRQMPRGI 216
            ||.:.          :.:|||..| .|..:..:....:...:|||..   ::..||.........
plant   111 RFHSN----------SSIRNLHFLTTLDLSFNDFKGQITSSIENLSHLTYLDLSSNHFSGQILNS 165

  Fly   217 FGKMPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDI-HDNGIEQLPHDVFAHLTNVTDINLSANL 280
            .|.:.:|..|||:.||............:.:..:|: ::....|.|..: ..|:::|.::|.:|.
plant   166 IGNLSRLTYLNLFDNQFSGQAPSSICNLSHLTFLDLSYNRFFGQFPSSI-GGLSHLTTLSLFSNK 229

  Fly   281 FRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPELQILRLRA-----ELQSLPGDLFEH 340
            |.........:..:|..:.|.||... ..:|| ...|..:|..|.|.:     |:.|..|:|   
plant   230 FSGQIPSSIGNLSNLTTLDLSNNNFS-GQIPS-FIGNLSQLTFLGLFSNNFVGEIPSSFGNL--- 289

  Fly   341 STQITNISLGDNLLK-TLPATLLEHQVNLLSLDLSNNRLT-HLPDSLFAHTTNLTDLRLEDNLLT 403
             .|:|.:.:.||.|. ..|..|| :...|..|.||||:.| .||.:: ...:||.|....||..|
plant   290 -NQLTRLYVDDNKLSGNFPNVLL-NLTGLSLLSLSNNKFTGTLPPNI-TSLSNLMDFDASDNAFT 351

  Fly   404 GISGDIFSNLGNLVTLVMSRNRLR-TIDSRAFVSTNGLRHLHLDHNDIDLQQP----------LL 457
            |........:.:|..:.::.|:|: |::.....|.:.|..|.:.:|:.....|          .|
plant   352 GTFPSFLFTIPSLTYIRLNGNQLKGTLEFGNISSPSNLYELDIGNNNFIGPIPSSISKLVKLFRL 416

  Fly   458 DIM-LQTQ--IN-SPFGYMHGLLTLNLR--NNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYED 516
            ||. |.||  :: |.|.::..||.||:.  |.:.....|.:.:...:|..||||.|::|:.....
plant   417 DISHLNTQGPVDFSIFSHLKSLLDLNISHLNTTTRIDLNYFLSYFKRLLLLDLSGNHVSATNKSS 481

  Fly   517 LA----------FLS-------------QNRL-HVNMTHNKIR--------RIALPEDVHLGEGY 549
            ::          :||             |:.| .:::::|||:        |:.:          
plant   482 VSDPPSQLIQSLYLSGCGITEFPEFVRTQHELGFLDISNNKIKGQVPDWLWRLPI---------- 536

  Fly   550 NNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKPQYSRQFKLRTDRLVCSQPNVLEGTPVRQIEPQ 614
               |.:|:|::|.|:             |..:|.......|   .|:.|..|.:...|       
plant   537 ---LYYVNLSNNTLI-------------GFQRPSKPEPSLL---YLLGSNNNFIGKIP------- 575

  Fly   615 TLIC------PLDFSDDPRERKCPRGCNCHVRTYDKALVINCHSGNLTHVPRLPNLHKNMQLMEL 673
            :.||      .||.||:......|| |..|:::....|                ||.:|      
plant   576 SFICGLRSLNTLDLSDNNFNGSIPR-CMGHLKSTLSVL----------------NLRQN------ 617

  Fly   674 HLENNTLLRLPSANTPGYESVTSLHLAGNNLTSIDVDQLPTNLTHLDISWNHLQMLNATVLGFLN 738
            ||...    ||...   :|.:.||.:..|.|    |.:||.:|:.    ::.|::||.. ...:|
plant   618 HLSGG----LPKQI---FEILRSLDVGHNQL----VGKLPRSLSF----FSTLEVLNVE-SNRIN 666

  Fly   739 RTMKWRSVKLSGNPWMCDCTAKPLLLFTQDNFE-----------RIGD--RNEMMCVNAEMPTR- 789
            .|..:         |:.......:|:...:.|.           ||.|  .|..   |..:||. 
plant   667 DTFPF---------WLSSLPKLQVLVLRSNAFHGPIHEATFPELRIIDISHNRF---NGTLPTEY 719

  Fly   790 ------MVELSTNDICPAEK-----------GVFIALAVVIALTGLLAGFTAALY--YKFQTEI- 834
                  |..|..|:....||           .|.:...|.:.|..:|..:||..:  .:|:.|| 
plant   720 FVKWSAMSSLGKNEDQSNEKYMGSGLYYQDSMVLMNKGVAMELVRILTIYTAVDFSGNRFEGEIP 784

  Fly   835 -KIWLYAHNLLLWFVTE----------------EDLDKDK--------------KFDAFISYSHK 868
             .|.|....|:|.....                |.||..|              .|.|::::||.
plant   785 KSIGLLKELLVLSLSNNAFSGHMPSSMGNLTALESLDVSKNKLTGEIPQELGDLSFLAYMNFSHN 849

  Fly   869 DQSFIEDYLVPQLEHGPQKF--QLCVHERDWL-VGGHIPENIMRSV 911
            ..:    .|||    |.|:|  |.|....|.| :.|...|.:.|.:
plant   850 QLA----GLVP----GGQQFLTQNCSAFEDNLGLFGSSLEEVCRDI 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:290566 16/62 (26%)
leucine-rich repeat 176..198 CDD:275380 3/22 (14%)
leucine-rich repeat 199..222 CDD:275380 4/25 (16%)
LRR_RI 216..542 CDD:238064 91/382 (24%)
LRR_8 221..281 CDD:290566 13/60 (22%)
leucine-rich repeat 223..270 CDD:275380 10/47 (21%)
leucine-rich repeat 271..294 CDD:275380 4/22 (18%)
leucine-rich repeat 295..320 CDD:275380 7/24 (29%)
leucine-rich repeat 321..343 CDD:275380 7/26 (27%)
LRR_8 342..402 CDD:290566 22/61 (36%)
leucine-rich repeat 344..367 CDD:275380 7/23 (30%)
leucine-rich repeat 368..391 CDD:275380 9/23 (39%)
LRR_8 390..450 CDD:290566 15/60 (25%)
leucine-rich repeat 392..415 CDD:275380 6/22 (27%)
leucine-rich repeat 416..439 CDD:275380 5/23 (22%)
leucine-rich repeat 440..474 CDD:275380 12/47 (26%)
leucine-rich repeat 475..498 CDD:275380 6/24 (25%)
LRR_8 477..534 CDD:290566 16/82 (20%)
leucine-rich repeat 499..520 CDD:275380 7/30 (23%)
leucine-rich repeat 523..552 CDD:275380 5/37 (14%)
LRRCT 561..619 CDD:214507 11/63 (17%)
LRRNT 631..667 CDD:214470 7/35 (20%)
leucine-rich repeat 664..693 CDD:275380 6/28 (21%)
LRR_8 669..726 CDD:290566 13/56 (23%)
leucine-rich repeat 694..715 CDD:275380 7/20 (35%)
leucine-rich repeat 716..737 CDD:275380 4/20 (20%)
LRRCT 751..800 CDD:214507 13/68 (19%)
TIR 858..996 CDD:214587 17/57 (30%)
RLP53NP_001332753.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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