DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and CG7800

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster


Alignment Length:669 Identity:140/669 - (20%)
Similarity:237/669 - (35%) Gaps:205/669 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 SDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEEMPSHLFDDLEN 198
            ||.....:|..|:|...                ..:|..|.||..||               |||
  Fly    39 SDKKATKLTEFHMDSCE----------------KKVLKLMPNLRTLE---------------LEN 72

  Fly   199 LESIEFGSNKLRQMP--------RG--------IFGKMPKLKQLNLWSNQLHNLTKHDFEGATSV 247
            .:|.:|..|.|.|:|        ||        .|.|.|.:|.|.|..|.:..|:...|:|...:
  Fly    73 CDSPDFTMNDLNQLPYLTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQL 137

  Fly   248 LGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPS 312
            ..:.:..|||:.||.|||.:|..:..::||.|                          .:.||..
  Fly   138 WLLSLPGNGIQGLPWDVFQNLPELLHLDLSGN--------------------------RIETLHE 176

  Fly   313 RLFANQPELQILRLRAELQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNR 377
            .:|...|:|::|.|..                       |.|..:..|.|:...||..||:||  
  Fly   177 NIFTGVPKLEMLLLNG-----------------------NPLTWIAPTSLKSLSNLRLLDMSN-- 216

  Fly   378 LTHLPDSLF--AHTTNLTDLRLEDNLLTGISG-DIFSNLGNLVTLVMSRNRLRTI---DSRAFVS 436
            ...|||...  |||..|      ||  :|:.. ||   ||::..|...:|.:..|   |..:.: 
  Fly   217 CGPLPDLSLPGAHTLIL------DN--SGVQRLDI---LGSVHKLQARKNHITEIKLPDKSSVI- 269

  Fly   437 TNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRE 501
                        ::||...||     |..:.|     .|||                 .|.:|:.
  Fly   270 ------------ELDLHSNLL-----TATDIP-----KLLT-----------------GMWRLQR 295

  Fly   502 LDLSYNNI---SSLGYEDLA--FLSQNRLHVNMTHNKIRRIALPEDVHLGEGYNNNLVHVDLNDN 561
            ||||.|.|   ::.|.::.:  |:..|.:::|::.|::.|:.....:..     ..|.|:|.:.|
  Fly   296 LDLSENIIGIYAAAGSDNTSELFILPNLMYMNLSANRLTRLHFDSPIPW-----ERLTHLDASYN 355

  Fly   562 PLVCDCTILWFIQLVRGVHKPQYSRQFKLRTDRLVCSQPNVLEGTPVRQIEPQTLICPLDFSDDP 626
            .:.....:        |:     ...|.|::..|..:..|..|.||.:   |...:..:...|:.
  Fly   356 RIYAPAKV--------GI-----DEAFNLQSLHLEGNYINNFELTPWK---PHPSLKEVALYDNK 404

  Fly   627 RERKCPRGCNCHVRTYDKALVINCHSGNLTHVPRLPNLHKNMQLMELHLENNTLLRLPSANTPGY 691
            .:   |:|.. ::..:...:.:|.                 ::..:....|||............
  Fly   405 FQ---PKGYK-NITKFFNEIGVNV-----------------LEKTQYSQSNNTTPTCKPCIPDAR 448

  Fly   692 ESVTSLHLAGNNLTSIDVDQLPTNLTHLDISWNHLQMLNATVLGFLNRTMKWRSVKLSGNPWMCD 756
            :..||:....|......|:.| :|.|:....||.|.:::..|..|:|..:..:.::|.|......
  Fly   449 DFPTSISADTNQTIDTKVNPL-SNDTYQWNVWNVLMLVSLIVSLFVNSFLIVKLIRLRGRNQFTQ 512

  Fly   757 CTAKPLL--LFTQDNFERI 773
            .::.|.:  :|:.::.:.|
  Fly   513 SSSVPAIIEMFSNESDDEI 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 22/74 (30%)
leucine-rich repeat 176..198 CDD:275380 4/21 (19%)
leucine-rich repeat 199..222 CDD:275380 10/38 (26%)
LRR 222..576 CDD:443914 81/364 (22%)
leucine-rich repeat 223..270 CDD:275380 16/46 (35%)
leucine-rich repeat 271..294 CDD:275380 3/22 (14%)
leucine-rich repeat 295..320 CDD:275380 3/24 (13%)
leucine-rich repeat 321..343 CDD:275380 3/21 (14%)
leucine-rich repeat 344..367 CDD:275380 4/22 (18%)
leucine-rich repeat 368..391 CDD:275380 11/24 (46%)
leucine-rich repeat 392..415 CDD:275380 7/23 (30%)
leucine-rich repeat 416..439 CDD:275380 4/25 (16%)
leucine-rich repeat 440..474 CDD:275380 6/33 (18%)
leucine-rich repeat 475..498 CDD:275380 4/22 (18%)
leucine-rich repeat 499..520 CDD:275380 8/25 (32%)
leucine-rich repeat 523..552 CDD:275380 4/28 (14%)
LRRCT 561..619 CDD:214507 10/57 (18%)
LRRNT 631..667 CDD:214470 3/35 (9%)
PPP1R42 <660..752 CDD:455733 18/91 (20%)
leucine-rich repeat 664..693 CDD:275380 3/28 (11%)
leucine-rich repeat 694..715 CDD:275380 5/20 (25%)
leucine-rich repeat 716..737 CDD:275380 5/20 (25%)
LRRCT 751..800 CDD:214507 3/25 (12%)
TIR 858..996 CDD:214587
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 5/33 (15%)
leucine-rich repeat 65..85 CDD:275380 10/34 (29%)
LRR 68..482 CDD:443914 122/573 (21%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
leucine-rich repeat 137..160 CDD:275380 9/22 (41%)
leucine-rich repeat 161..184 CDD:275380 6/48 (13%)
leucine-rich repeat 185..208 CDD:275380 7/45 (16%)
leucine-rich repeat 209..246 CDD:275380 18/49 (37%)
leucine-rich repeat 247..267 CDD:275380 4/19 (21%)
leucine-rich repeat 268..292 CDD:275380 10/63 (16%)
leucine-rich repeat 293..322 CDD:275380 9/28 (32%)
leucine-rich repeat 395..406 CDD:275378 1/10 (10%)
Blue background indicates that the domain is not in the aligned region.

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