DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and CG6749

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster


Alignment Length:610 Identity:140/610 - (22%)
Similarity:227/610 - (37%) Gaps:184/610 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ILQLLQW---PGSEASFGRDACSEMSIDGLCQCAPIMSEYEIICPANAE--------NPTFRLTI 69
            :|.||.|   .|.....|.|.|..:..... ||:.:.|..::: ...||        |....|.:
  Fly     8 VLPLLLWLLCMGFPILHGADLCQPIGWRNF-QCSEVASLQDLV-DLGAENWHTLAIRNVQTELEV 70

  Fly    70 QPKDYVQIMCNLTD------------TTDYQQLPKKLRIGEVDRVQMRRCMLPGHTPIASILDYL 122
            ...:....:.||.|            |..:..||           .:|:..|.|          .
  Fly    71 GSGENADHLANLLDLDLTGAAPINVHTNGFSILP-----------NLRQLNLSG----------C 114

  Fly   123 GIVSPTTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMR-----NLSHLELR 182
            |:|              :|...|......|:|..|:..::..:..:...::|     |.||..|:
  Fly   115 GLV--------------DIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHNALK 165

  Fly   183 -ANIEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATS 246
             .::..||.        |..:|.|.|:|   ....||..|:|::|.|..|||..|..:.|.|...
  Fly   166 QCDLPHMPL--------LNRLELGHNRL---VNATFGVCPQLQELILNDNQLIQLDVNAFRGLHG 219

  Fly   247 VLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLF----DHNKHLNEVRLMNNRVPL 307
            :|.:.:..|.:..:..:.|..|..:..:|||.|...:|...:|    :...||.::.|..||:.|
  Fly   220 LLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRL 284

  Fly   308 ATLPSRLFANQPELQILRLRAELQSLPGDLFEHSTQITNIS------LG---------DNLLKTL 357
                  ||.||     .|:.|.||.|  |:..:|  |.::|      ||         :.:|:..
  Fly   285 ------LFDNQ-----FRVLARLQML--DVSRNS--IASLSPAHFVGLGSLRKLYLQYNAILEIK 334

  Fly   358 PATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTT--NLTDLRLEDNLLTGISGDIFSNLGNLVTLV 420
            |||... .:||.:||||.|.|..|.:.:|...|  .:..|.|..|.:..:....||:|..|..|.
  Fly   335 PATFAA-LLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLK 398

  Fly   421 MSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSI 485
            :..|.|:::|.|.|.....|:.|||.||  .|::..||::                         
  Fly   399 LGHNELKSLDVRMFAPMRRLQKLHLGHN--LLEEINLDVL------------------------- 436

  Fly   486 IFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQNRLHVNMTHNKIRRIALPEDVHLGEGYN 550
                    .::..::|:.:..|.        |.||::    ||::...::|:|:       ||  
  Fly   437 --------ESLSSVQEILVDNNR--------LTFLAK----VNVSFPNLKRVAI-------EG-- 472

  Fly   551 NNLVHVDLNDNPLVCDCTILWFIQL 575
                      ||..|.|    |::|
  Fly   473 ----------NPWQCPC----FVKL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 19/64 (30%)
leucine-rich repeat 176..198 CDD:275380 5/22 (23%)
leucine-rich repeat 199..222 CDD:275380 7/22 (32%)
LRR 222..576 CDD:443914 94/375 (25%)
leucine-rich repeat 223..270 CDD:275380 13/46 (28%)
leucine-rich repeat 271..294 CDD:275380 6/26 (23%)
leucine-rich repeat 295..320 CDD:275380 9/24 (38%)
leucine-rich repeat 321..343 CDD:275380 7/21 (33%)
leucine-rich repeat 344..367 CDD:275380 8/37 (22%)
leucine-rich repeat 368..391 CDD:275380 10/24 (42%)
leucine-rich repeat 392..415 CDD:275380 6/22 (27%)
leucine-rich repeat 416..439 CDD:275380 7/22 (32%)
leucine-rich repeat 440..474 CDD:275380 9/33 (27%)
leucine-rich repeat 475..498 CDD:275380 0/22 (0%)
leucine-rich repeat 499..520 CDD:275380 3/20 (15%)
leucine-rich repeat 523..552 CDD:275380 6/28 (21%)
LRRCT 561..619 CDD:214507 6/15 (40%)
LRRNT 631..667 CDD:214470
PPP1R42 <660..752 CDD:455733
leucine-rich repeat 664..693 CDD:275380
leucine-rich repeat 694..715 CDD:275380
leucine-rich repeat 716..737 CDD:275380
LRRCT 751..800 CDD:214507
TIR 858..996 CDD:214587
CG6749NP_648354.1 LRR_8 104..164 CDD:404697 15/94 (16%)
leucine-rich repeat 106..129 CDD:275380 7/46 (15%)
leucine-rich repeat 130..153 CDD:275380 3/22 (14%)
leucine-rich repeat 154..195 CDD:275380 13/51 (25%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
LRR 199..>452 CDD:443914 78/311 (25%)
leucine-rich repeat 220..243 CDD:275380 4/22 (18%)
leucine-rich repeat 244..267 CDD:275380 6/22 (27%)
leucine-rich repeat 272..295 CDD:275380 10/33 (30%)
leucine-rich repeat 296..319 CDD:275380 8/26 (31%)
leucine-rich repeat 320..343 CDD:275380 4/23 (17%)
leucine-rich repeat 344..369 CDD:275380 10/24 (42%)
leucine-rich repeat 370..393 CDD:275380 6/22 (27%)
leucine-rich repeat 394..417 CDD:275380 7/22 (32%)
leucine-rich repeat 418..441 CDD:275380 9/57 (16%)
Blue background indicates that the domain is not in the aligned region.

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