Sequence 1: | NP_001262995.1 | Gene: | Tl / 43222 | FlyBaseID: | FBgn0262473 | Length: | 1117 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062051.2 | Gene: | Tlr4 / 29260 | RGDID: | 3870 | Length: | 835 | Species: | Rattus norvegicus |
Alignment Length: | 867 | Identity: | 210/867 - (24%) |
---|---|---|---|
Similarity: | 333/867 - (38%) | Gaps: | 233/867 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 305 VPL----ATLPSRLFANQPELQILRLRAELQSLPGDL---FEHSTQITNISLGDNLLKTLPATLL 362
Fly 363 EHQV--NLLSLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNR 425
Fly 426 LRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHG----LLTLNLRNNSI- 485
Fly 486 IFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQN-------------------------RL 525
Fly 526 H------------------VNMTHNKIRRIALPE----------DVHLGEGYNN------NLVHV 556
Fly 557 D-LNDNPLVCDCTILWFIQLVRGVHKPQYS---RQFKLRTDRLV-C--------SQPNVLEGTPV 608
Fly 609 RQIEP----QTLICPLDFSDDPRERKCPRGCNCHVR------------TYDKALVINCHSGNLTH 657
Fly 658 VPRLPNLHKNMQLME-----LHLENNTLLRLPSANTP--------GYESVTSLHLAGNNL---TS 706
Fly 707 IDVDQLPTNLTHLDIS--------------WNHLQMLN--------------------------- 730
Fly 731 ---ATVLGFLNRTMKWRSV-KLSGNPWMCDCTAKPLLLFTQDNFERIGDRNEMMCVN-AEMPTRM 790
Fly 791 VELSTNDICPAEKGVFIALAVVIALTGLLAGFTAALYYKFQTEIKIWLYAHNLLL----WFVTEE 851
Fly 852 DLDKDKKFDAFISYSHKDQSFIEDYLVPQLEHGPQKFQLCVHERDWLVGGHIPENIMR-SVADSR 915
Fly 916 RTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIYSDIGDVEK--LDEELKAY--LKMNT 976
Fly 977 YLKW-----GDPWFWDKLRFAL 993 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tl | NP_001262995.1 | LRR_8 | 174..233 | CDD:290566 | |
leucine-rich repeat | 176..198 | CDD:275380 | |||
leucine-rich repeat | 199..222 | CDD:275380 | |||
LRR_RI | 216..542 | CDD:238064 | 71/303 (23%) | ||
LRR_8 | 221..281 | CDD:290566 | |||
leucine-rich repeat | 223..270 | CDD:275380 | |||
leucine-rich repeat | 271..294 | CDD:275380 | |||
leucine-rich repeat | 295..320 | CDD:275380 | 6/18 (33%) | ||
leucine-rich repeat | 321..343 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 342..402 | CDD:290566 | 17/61 (28%) | ||
leucine-rich repeat | 344..367 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 368..391 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 390..450 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 392..415 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 416..439 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 440..474 | CDD:275380 | 5/33 (15%) | ||
leucine-rich repeat | 475..498 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 477..534 | CDD:290566 | 23/100 (23%) | ||
leucine-rich repeat | 499..520 | CDD:275380 | 9/20 (45%) | ||
leucine-rich repeat | 523..552 | CDD:275380 | 14/87 (16%) | ||
LRRCT | 561..619 | CDD:214507 | 13/73 (18%) | ||
LRRNT | 631..667 | CDD:214470 | 7/47 (15%) | ||
leucine-rich repeat | 664..693 | CDD:275380 | 8/41 (20%) | ||
LRR_8 | 669..726 | CDD:290566 | 21/86 (24%) | ||
leucine-rich repeat | 694..715 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 716..737 | CDD:275380 | 11/64 (17%) | ||
LRRCT | 751..800 | CDD:214507 | 11/49 (22%) | ||
TIR | 858..996 | CDD:214587 | 54/146 (37%) | ||
Tlr4 | NP_062051.2 | PLN00113 | 23..>456 | CDD:215061 | 94/454 (21%) |
LRR 1 | 54..75 | 8/20 (40%) | |||
leucine-rich repeat | 58..78 | CDD:275380 | 8/19 (42%) | ||
LRR 2 | 78..99 | 4/20 (20%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 5/22 (23%) | ||
LRR 3 | 102..123 | 6/20 (30%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 6/22 (27%) | ||
LRR 4 | 126..147 | 5/35 (14%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 6/37 (16%) | ||
LRR 5 | 150..171 | 6/20 (30%) | |||
leucine-rich repeat | 151..175 | CDD:275380 | 6/23 (26%) | ||
LRR 6 | 175..198 | 10/22 (45%) | |||
leucine-rich repeat | 176..204 | CDD:275380 | 12/27 (44%) | ||
LRR 7 | 204..224 | 0/19 (0%) | |||
leucine-rich repeat | 205..226 | CDD:275380 | 0/20 (0%) | ||
LRR 8 | 226..247 | 3/20 (15%) | |||
leucine-rich repeat | 256..310 | CDD:275380 | 10/53 (19%) | ||
LRR 9 | 372..381 | 2/8 (25%) | |||
leucine-rich repeat | 373..398 | CDD:275380 | 7/25 (28%) | ||
LRR 10 | 398..420 | 0/21 (0%) | |||
leucine-rich repeat | 399..421 | CDD:275380 | 1/21 (5%) | ||
LRR 11 | 421..442 | 2/20 (10%) | |||
leucine-rich repeat | 422..446 | CDD:275380 | 4/23 (17%) | ||
LRR 12 | 446..467 | 3/20 (15%) | |||
leucine-rich repeat | 447..470 | CDD:275380 | 4/22 (18%) | ||
LRR 13 | 470..491 | 7/20 (35%) | |||
leucine-rich repeat | 471..495 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 494..554 | CDD:404697 | 11/59 (19%) | ||
LRR 14 | 495..516 | 6/20 (30%) | |||
leucine-rich repeat | 496..519 | CDD:275380 | 5/22 (23%) | ||
LRR 15 | 519..540 | 4/20 (20%) | |||
leucine-rich repeat | 520..543 | CDD:275380 | 4/22 (18%) | ||
LRR 16 | 543..564 | 3/20 (15%) | |||
leucine-rich repeat | 544..567 | CDD:275380 | 3/22 (14%) | ||
TIR | 672..813 | CDD:214587 | 52/143 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24365 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |