DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and Tlr5

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001139300.1 Gene:Tlr5 / 289337 RGDID:631351 Length:871 Species:Rattus norvegicus


Alignment Length:960 Identity:215/960 - (22%)
Similarity:394/960 - (41%) Gaps:206/960 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 HTPIASILDYL-GIVSPTTLIFE-----SDN-----LGMNITR-----QHLDRLHGLKRFRF-TT 159
            |..:|..||.| |:|...:.:.|     ||.     .|.|:|:     ...:||  |..|.: :|
  Rat    10 HRIMAYQLDLLIGVVFMASPVLEMSPCFSDGRIALFRGCNLTQIPWVLNTTERL--LLSFNYIST 72

  Fly   160 RRLTHIPANLLTDMRNLSHLELRANIEEMP--SHLFDDLENLESIEFGSNKLRQMPRGIFGKMPK 222
            ...|..|.     :..|..|||......:.  ...|.:|.||..::.|.:::..:....|..:|.
  Rat    73 VVTTSFPL-----LEQLLLLELGTQYARLTIGQEAFRNLPNLRILDLGQSQIEVLNPDAFQGLPH 132

  Fly   223 LKQLNLWSNQLHNLTKHD--FEGATSVLGIDIHDNGIEQLP-HDVFAHLTNVTDINLSANLFRSL 284
            |.:|.|:...|.|....|  |....|:..:|:..|.|..|. |..|..|::::|||.|.|...:|
  Rat   133 LFELRLFDCGLSNAVLRDAYFRNLNSLARLDLSANEIHSLHLHSSFQELSSLSDINFSFNRIFTL 197

  Fly   285 PQGLFDHNKHLNEVRLMNNR------VPLATLPSRLF----ANQPELQILRLRA-ELQ------S 332
            .:         :|::.:..|      :...:|.||:|    |.:..|:.:||.. :|.      :
  Rat   198 CE---------DELQPLQGRTLSFFGLKSTSLFSRVFVDWEACRNPLRGIRLETLDLSENGWTAA 253

  Fly   333 LPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPD-SLFAH--TTNLTD 394
            :.|: |.|:.|.::||          :.:|.:.:........|.:   .|| |.||.  .:::..
  Rat   254 ILGN-FSHTIQGSHIS----------SLILTYHIMGSGFGFQNIK---DPDQSTFASLARSSVLQ 304

  Fly   395 LRLEDNLLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDI 459
            |.|....:..::..:|..|.:|..|.::.|::..|...||...:.|:.|:|.:|           
  Rat   305 LDLSHGYIFSLNPRLFETLKDLKKLNLAFNKINKISDYAFHGLDSLQILNLSYN----------- 358

  Fly   460 MLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGY---EDLAFLS 521
            :|....||.|..:..:..|:|:.|.|..:.:.....:.:|:.|||..|.:.::|:   ..:..|.
  Rat   359 LLGELYNSNFYGLPSIAYLDLQRNHIGIIQDRTFRLLKKLQTLDLRDNALKTIGFIPSVQMVLLG 423

  Fly   522 QNRL----HVNMTHNKIRRIALPEDVHLGEGYNNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKP 582
            .|:|    ||..|.|                      .::|::|.|. :.:.|:|:..:.|:   
  Rat   424 SNKLTHLPHVRFTAN----------------------FIELSENGLE-NLSDLYFLLRIPGL--- 462

  Fly   583 QYSRQFKLRTDRLVCSQPNVLEGTPVRQIEPQTLICPLDFSDDPRERKCPRGCNCHVRTYDKALV 647
                ||.:.....:.|..|| :..|.:.:..:.|...                       :..|.
  Rat   463 ----QFLILNQNRLSSCSNV-DYAPSQNLSLEQLFLA-----------------------ENMLQ 499

  Fly   648 INCHSGNLTHVPRLPNLHKNM-QLMELHLENNTLLRLPSANTPGYESVTSLHLAGNNLTSIDVDQ 711
            :...:|...      ::.|.: :|..|:|.||.|..||.....|..::..|.|:.|.||.:....
  Rat   500 LAWETGLCW------DIFKGLSRLQILYLNNNYLNFLPPGIFNGLVALRMLSLSANRLTMLSPGS 558

  Fly   712 LPTNLTHLDISWNHLQMLNATVLGFLNRTMKWRSVKLSGNPWMCDCTAKPLLLF-TQDNFERIGD 775
            ||.||..||||.|.|...:..:...|      |::.::.|.::|||.....::: .|.|....|.
  Rat   559 LPANLEILDISRNQLFSPDPGLFSSL------RALDITHNEFICDCELSTFIVWLNQTNVTLFGS 617

  Fly   776 RNEMMCV--NAEMPTRMVELSTNDICPAEKGV-----------FIALAVVIALTGLLAGFTAALY 827
            ..::.|:  |:.:.:.:..:||.| |..|:.|           .:.|.:.:.:|.::..|....:
  Rat   618 PADVYCMYPNSLLGSSLYNISTKD-CDEEEAVRSLNFSLFILCTVTLTLFLVITLIVTKFRGICF 681

  Fly   828 YKFQTEIKIWLYAHNLLLWFVTEEDLDKDK---------KFDAFISYSHKDQSFIEDYLVPQLE- 882
            ..|:|..|:                :.|.|         ::||:..:|.||..:.::.|:..|: 
  Rat   682 LCFKTIQKL----------------MFKGKFRNPEPSAYRYDAYFCFSSKDFEWAQNALLKHLDA 730

  Fly   883 --HGPQKFQLCVHERDWLVGGHIPENIMRSVADSRRTIIVLSQNFIKSEWARLEFRAAHRSALNE 945
              ....:.:||..|||::.|.:...||..:|..||:|:.::|::|:|..|....||.|....|::
  Rat   731 QYSSQNRLRLCFEERDFIPGENHISNIQAAVWGSRKTVCLVSRHFLKDGWCLEAFRYAQSRCLSD 795

  Fly   946 GRSRIIVIIYSDIGDVEKL-DEELKAYLKMNTYLKWGD-----PWFWDKL 989
            .:..:||::...:...:.: .|.::.:|:...||:|.:     .||.|||
  Rat   796 LKRVLIVVVVGSLPQYQLMRHETIRGFLQKQQYLRWPEDLQDVDWFLDKL 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 14/60 (23%)
leucine-rich repeat 176..198 CDD:275380 6/23 (26%)
leucine-rich repeat 199..222 CDD:275380 3/22 (14%)
LRR 222..576 CDD:443914 85/383 (22%)
leucine-rich repeat 223..270 CDD:275380 15/49 (31%)
leucine-rich repeat 271..294 CDD:275380 6/22 (27%)
leucine-rich repeat 295..320 CDD:275380 7/34 (21%)
leucine-rich repeat 321..343 CDD:275380 7/28 (25%)
leucine-rich repeat 344..367 CDD:275380 3/22 (14%)
leucine-rich repeat 368..391 CDD:275380 6/25 (24%)
leucine-rich repeat 392..415 CDD:275380 4/22 (18%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
leucine-rich repeat 440..474 CDD:275380 8/33 (24%)
leucine-rich repeat 475..498 CDD:275380 4/22 (18%)
leucine-rich repeat 499..520 CDD:275380 6/23 (26%)
leucine-rich repeat 523..552 CDD:275380 6/32 (19%)
LRRCT 561..619 CDD:214507 12/57 (21%)
LRRNT 631..667 CDD:214470 2/35 (6%)
PPP1R42 <660..752 CDD:455733 27/92 (29%)
leucine-rich repeat 664..693 CDD:275380 10/29 (34%)
leucine-rich repeat 694..715 CDD:275380 7/20 (35%)
leucine-rich repeat 716..737 CDD:275380 7/20 (35%)
LRRCT 751..800 CDD:214507 12/51 (24%)
TIR 858..996 CDD:214587 39/141 (28%)
Tlr5NP_001139300.1 LRR <95..323 CDD:443914 55/250 (22%)
LRR_8 <96..143 CDD:404697 10/46 (22%)
leucine-rich repeat 109..132 CDD:275380 3/22 (14%)
leucine-rich repeat 133..158 CDD:275380 7/24 (29%)
leucine-rich repeat 159..183 CDD:275380 7/23 (30%)
leucine-rich repeat 184..217 CDD:275380 8/41 (20%)
leucine-rich repeat 240..301 CDD:275380 15/74 (20%)
LRR 261..>573 CDD:443914 84/395 (21%)
leucine-rich repeat 302..325 CDD:275380 4/22 (18%)
leucine-rich repeat 326..349 CDD:275380 6/22 (27%)
leucine-rich repeat 350..373 CDD:275380 8/33 (24%)
leucine-rich repeat 374..397 CDD:275380 4/22 (18%)
leucine-rich repeat 398..432 CDD:275380 9/33 (27%)
leucine-rich repeat 433..461 CDD:275380 8/50 (16%)
leucine-rich repeat 462..487 CDD:275380 6/32 (19%)
leucine-rich repeat 488..516 CDD:275380 4/56 (7%)
leucine-rich repeat 517..540 CDD:275380 9/22 (41%)
leucine-rich repeat 541..559 CDD:275380 5/17 (29%)
leucine-rich repeat 563..586 CDD:275380 8/28 (29%)
PCC 567..>645 CDD:188093 20/84 (24%)
TIR 706..856 CDD:396246 39/140 (28%)

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