DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and Tlr1

DIOPT Version :9

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001263374.1 Gene:Tlr1 / 21897 MGIID:1341295 Length:795 Species:Mus musculus


Alignment Length:825 Identity:195/825 - (23%)
Similarity:307/825 - (37%) Gaps:203/825 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 TLPSRLFANQPELQILRLRAELQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDL 373
            ||.....:.:.||.|.|..|.|..:|.||   ..|.|.:.|..|.:..|..:.:.....|..|.:
Mouse    18 TLMKIQLSEECELIIKRPNANLTRVPKDL---PLQTTTLDLSQNNISELQTSDILSLSKLRVLIM 79

  Fly   374 SNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGI----------------SGDI------FSNLGNL 416
            |.|||.:|..|:|...|.|..|.|..|.|..|                :.|.      |.|:..|
Mouse    80 SYNRLQYLNISVFKFNTELEYLDLSHNELKVILCHPTVSLKHLDLSFNAFDALPICKEFGNMSQL 144

  Fly   417 VTLVMSRNRLRTIDSRAFVSTN-------------------GLRH-----LHLDHNDIDLQQPLL 457
            ..|.:|.:|:::...:.....|                   .|||     ||:........:.||
Mouse   145 QFLGLSGSRVQSSSVQLIAHLNISKVLLVLGDAYGEKEDPESLRHVSTETLHIVFPSKREFRFLL 209

  Fly   458 DIMLQTQINSPFG-------------YMHGLLTL-------NLRNNSIIFVYNDWKNTMLQLREL 502
            |:.:.|.|.....             ::..|..|       ||..|::...:|.:.|.:..:...
Mouse   210 DVSVSTTIGLELSNIKCVLEDQGCSYFLRALSKLGKNLKLSNLTLNNVETTWNSFINILQIVWHT 274

  Fly   503 DLSYNNISSL-----------GYEDLA------------------------FLSQNRLHVNMTHN 532
            .:.|.:||::           .|.|.:                        |.:.|..:..|:..
Mouse   275 PVKYFSISNVKLQGQLAFRMFNYSDTSLKALSIHQVVTDVFSFPQSYIYSIFANMNIQNFTMSGT 339

  Fly   533 KIRRIALPEDVHLGEGYNNNLVHVDLNDNPLV----CDCTILWFIQLVRGVHKPQYSRQFKLRTD 593
            .:..:..|..|       :..:|||..||.|.    .||.     .|||            |:|.
Mouse   340 HMVHMLCPSQV-------SPFLHVDFTDNLLTDMVFKDCR-----NLVR------------LKTL 380

  Fly   594 RLVCSQPNVLEGTPVRQIEPQTLICPLDFSDDPRERKCPRGCNCHVRTYDKALVINCHSGNLT-H 657
            .|..:|...||...:...: .|.:..||.|.:.. |....|..|  ......||:|..|..|| .
Mouse   381 SLQKNQLKNLENIILTSAK-MTSLQKLDISQNSL-RYSDGGIPC--AWTQSLLVLNLSSNMLTGS 441

  Fly   658 VPRLPNLHKNMQLMELHLENNTLLRLPSANTPGYESVTSLHLAGNNLTSIDVDQLPTNLTHLDIS 722
            |.|.  |...:::::||  ||.::.:|. :....:::..|::|.|:||.:......::|:.|.|.
Mouse   442 VFRC--LPPKVKVLDLH--NNRIMSIPK-DVTHLQALQELNVASNSLTDLPGCGAFSSLSVLVID 501

  Fly   723 WNHLQMLNATVLGFLNRTMKWRSVKLSGNPWMCDCTAKPLLLFTQDNFERIG------------- 774
            .|.:...:.   .|.......||:....||:.|.|..:       |..:.||             
Mouse   502 HNSVSHPSE---DFFQSCQNIRSLTAGNNPFQCTCELR-------DFVKNIGWVAREVVEGWPDS 556

  Fly   775 ---DRNEMMCVNAEMPTRMVELSTNDICPAEKGVFIALAVVIALTGLLAGFTAA---LYYKFQTE 833
               |..|.....|.....|..||.:.         :.|.|.|..|.|:...|.|   ||:...  
Mouse   557 YRCDYPESSRGTALRDFHMSPLSCDT---------VLLTVTIGATMLVLAVTGAFLCLYFDLP-- 610

  Fly   834 IKIWLYAHNLLLWFVTE--------EDLDKDKKFDAFISYSHKDQSFIEDYLVPQLEHGPQKFQL 890
               | |...|..|..|.        |:|.::.:|.||:|||..|.:::::.|:|.||  ....|:
Mouse   611 ---W-YVRMLCQWTQTRHRARHIPLEELQRNLQFHAFVSYSGHDSAWVKNELLPNLE--KDDIQI 669

  Fly   891 CVHERDWLVGGHIPENIMRSVADSRRTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIY 955
            |:|||:::.|..|.|||:..:..|.::|.|||.:||:|||...|...||.:..:||...:|:|:.
Mouse   670 CLHERNFVPGKSIVENIINFIEKSYKSIFVLSPHFIQSEWCHYELYFAHHNLFHEGSDNLILILL 734

  Fly   956 SDIG--DVEKLDEELKAYLKMNTYLKWGDP-----WFWDKLRFAL 993
            :.|.  .:.....:||..:...|||:|...     .||..||.::
Mouse   735 APIPQYSIPTNYHKLKTLMSRRTYLEWPTEKNKHGLFWANLRASI 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:290566
leucine-rich repeat 176..198 CDD:275380
leucine-rich repeat 199..222 CDD:275380
LRR_RI 216..542 CDD:238064 66/333 (20%)
LRR_8 221..281 CDD:290566
leucine-rich repeat 223..270 CDD:275380
leucine-rich repeat 271..294 CDD:275380
leucine-rich repeat 295..320 CDD:275380 2/10 (20%)
leucine-rich repeat 321..343 CDD:275380 8/21 (38%)
LRR_8 342..402 CDD:290566 19/59 (32%)
leucine-rich repeat 344..367 CDD:275380 4/22 (18%)
leucine-rich repeat 368..391 CDD:275380 9/22 (41%)
LRR_8 390..450 CDD:290566 20/105 (19%)
leucine-rich repeat 392..415 CDD:275380 9/44 (20%)
leucine-rich repeat 416..439 CDD:275380 5/41 (12%)
leucine-rich repeat 440..474 CDD:275380 10/51 (20%)
leucine-rich repeat 475..498 CDD:275380 7/29 (24%)
LRR_8 477..534 CDD:290566 14/98 (14%)
leucine-rich repeat 499..520 CDD:275380 5/55 (9%)
leucine-rich repeat 523..552 CDD:275380 4/28 (14%)
LRRCT 561..619 CDD:214507 14/61 (23%)
LRRNT 631..667 CDD:214470 11/36 (31%)
leucine-rich repeat 664..693 CDD:275380 6/28 (21%)
LRR_8 669..726 CDD:290566 14/56 (25%)
leucine-rich repeat 694..715 CDD:275380 5/20 (25%)
leucine-rich repeat 716..737 CDD:275380 4/20 (20%)
LRRCT 751..800 CDD:214507 13/64 (20%)
TIR 858..996 CDD:214587 49/143 (34%)
Tlr1NP_001263374.1 PRK15370 <38..>133 CDD:185268 26/97 (27%)
LRR <48..317 CDD:227223 51/268 (19%)
leucine-rich repeat 50..73 CDD:275378 4/22 (18%)
LRR 1 54..77 4/22 (18%)
leucine-rich repeat 74..97 CDD:275378 9/22 (41%)
LRR 2 78..101 9/22 (41%)
leucine-rich repeat 98..118 CDD:275378 6/19 (32%)
LRR 3 102..125 4/22 (18%)
leucine-rich repeat 119..143 CDD:275378 3/23 (13%)
LRR 4 126..150 5/23 (22%)
leucine-rich repeat 144..156 CDD:275378 4/11 (36%)
LRR 5 151..175 2/23 (9%)
LRR 6 176..199 5/22 (23%)
LRR 7 200..223 5/22 (23%)
LRR 8 224..250 2/25 (8%)
LRR 9 251..278 5/26 (19%)
LRR 10 279..308 4/28 (14%)
LRR 11 309..337 2/27 (7%)
Interaction with bacterial lipopeptide. /evidence=ECO:0000250 316..319 0/2 (0%)
LRR 12 338..361 5/29 (17%)
leucine-rich repeat 355..376 CDD:275380 9/25 (36%)
LRR 13 362..388 10/42 (24%)
PRK15370 <377..>487 CDD:185268 32/118 (27%)
leucine-rich repeat 377..402 CDD:275380 6/25 (24%)
LRR 14 389..414 6/26 (23%)
leucine-rich repeat 403..427 CDD:275380 6/26 (23%)
LRR 15 415..437 6/23 (26%)
leucine-rich repeat 428..449 CDD:275380 9/22 (41%)
LRR 16 438..457 7/22 (32%)
leucine-rich repeat 450..472 CDD:275380 5/24 (21%)
LRR 17 458..478 3/20 (15%)
leucine-rich repeat 473..494 CDD:275380 5/20 (25%)
LRR 18 479..500 6/20 (30%)
leucine-rich repeat 495..518 CDD:275380 5/25 (20%)
LRR 19 501..524 4/25 (16%)
LRRCT 527..581 CDD:214507 13/60 (22%)
TIR 639..782 CDD:214587 49/143 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 1 1.000 - - FOG0000239
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X221
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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