DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tl and Cd180

DIOPT Version :9

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_032559.2 Gene:Cd180 / 17079 MGIID:1194924 Length:661 Species:Mus musculus


Alignment Length:666 Identity:157/666 - (23%)
Similarity:261/666 - (39%) Gaps:180/666 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 CNLTDTTDYQQLPKKLRIGEVDRVQMRRC------MLPGHTPIAS-ILDYLGIVSPT---TLIFE 133
            |..|.::|.:.:.|     ||::..  .|      .:||..|.:: .|::...|.||   |....
Mouse    18 CRATTSSDQKCIEK-----EVNKTY--NCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSR 75

  Fly   134 SDNLG-MNITR-----QHLDRL---HGLKRFRFTTRRLTHIPANLLTDMRNLSHLEL----RANI 185
            ..||. :::||     .|.|..   |.|.....|...|..:....|:..:.|.||..    .::|
Mouse    76 LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSI 140

  Fly   186 EEMPSHLFDDLENLESIEFGSNKLR--QMPRGIFGKMPKLKQLNLWSNQLHNLTKHD---FEGAT 245
            :.:|.|   :.:.|||:..|||.:.  ::|:|.  ...|||.|:..:|.:|.|:|.|   .:.||
Mouse   141 DFIPLH---NQKTLESLYLGSNHISSIKLPKGF--PTEKLKVLDFQNNAIHYLSKEDMSSLQQAT 200

  Fly   246 SVLGIDIHDN---GIEQLPHD-----------------VFAHLTN-------------------- 270
            : |.::::.|   |||....|                 :|..|.|                    
Mouse   201 N-LSLNLNGNDIAGIELGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 264

  Fly   271 -----------VTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPELQIL 324
                       |..|||..:.|.::....|.....|.|:.|  ....|:.|||.|..    |..|
Mouse   265 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDL--TATHLSELPSGLVG----LSTL 323

  Fly   325 RLRAELQSLPGDLFEHSTQI--------TNISLGDNLLK-TLPATLLEHQVNLLSLDLS------ 374
            :...    |..:.||:..||        |::|:..|..: .|....||:..||..||||      
Mouse   324 KKLV----LSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 384

  Fly   375 ----NNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRA-F 434
                |.:|.:|        ::|..|.|..|....:..:.|.....|..|.::..||:..|::: |
Mouse   385 SDCCNLQLRNL--------SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPF 441

  Fly   435 VSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSI----IFVYNDWKNT 495
            .:.:.|:.|:|.|:.:|:....|           |..:..|..|||:.|..    |...|..: |
Mouse   442 QNLHLLKVLNLSHSLLDISSEQL-----------FDGLPALQHLNLQGNHFPKGNIQKTNSLQ-T 494

  Fly   496 MLQLRELDLSYNNISSLGYEDLAFLSQNRL-HVNMTHNKIRRIALPEDVHLGEGYNNNLVH---- 555
            :.:|..|.||:.::||:  :..||.|...: ||:::||::...::....|| :|...||..    
Mouse   495 LGRLEILVLSFCDLSSI--DQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL-KGIYLNLASNRIS 556

  Fly   556 ---------------VDLNDNPLVCDCTILWFIQLVRGVHKPQYSRQFKLR-TDRLVCSQPNVLE 604
                           ::|..|||.|.|:.::|::..:       ....||. |:..:|..|.:|.
Mouse   557 IILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWYK-------ENMQKLEDTEDTLCENPPLLR 614

  Fly   605 GTPVRQIEPQTLICPL 620
            |..:..:   ||.|.:
Mouse   615 GVRLSDV---TLSCSM 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:290566 19/64 (30%)
leucine-rich repeat 176..198 CDD:275380 6/25 (24%)
leucine-rich repeat 199..222 CDD:275380 8/24 (33%)
LRR_RI 216..542 CDD:238064 95/404 (24%)
LRR_8 221..281 CDD:290566 24/113 (21%)
leucine-rich repeat 223..270 CDD:275380 18/69 (26%)
leucine-rich repeat 271..294 CDD:275380 6/22 (27%)
leucine-rich repeat 295..320 CDD:275380 8/24 (33%)
leucine-rich repeat 321..343 CDD:275380 5/21 (24%)
LRR_8 342..402 CDD:290566 21/78 (27%)
leucine-rich repeat 344..367 CDD:275380 7/31 (23%)
leucine-rich repeat 368..391 CDD:275380 8/32 (25%)
LRR_8 390..450 CDD:290566 15/60 (25%)
leucine-rich repeat 392..415 CDD:275380 5/22 (23%)
leucine-rich repeat 416..439 CDD:275380 6/23 (26%)
leucine-rich repeat 440..474 CDD:275380 7/33 (21%)
leucine-rich repeat 475..498 CDD:275380 8/26 (31%)
LRR_8 477..534 CDD:290566 20/61 (33%)
leucine-rich repeat 499..520 CDD:275380 7/20 (35%)
leucine-rich repeat 523..552 CDD:275380 7/29 (24%)
LRRCT 561..619 CDD:214507 15/58 (26%)
LRRNT 631..667 CDD:214470
leucine-rich repeat 664..693 CDD:275380
LRR_8 669..726 CDD:290566
leucine-rich repeat 694..715 CDD:275380
leucine-rich repeat 716..737 CDD:275380
LRRCT 751..800 CDD:214507
TIR 858..996 CDD:214587
Cd180NP_032559.2 leucine-rich repeat 38..57 CDD:275380 4/18 (22%)
LRR 1 54..75 5/20 (25%)
leucine-rich repeat 58..78 CDD:275380 5/19 (26%)
LRR 2 78..99 6/20 (30%)
leucine-rich repeat 79..102 CDD:275380 5/22 (23%)
LRR 3 102..123 4/20 (20%)
leucine-rich repeat 103..126 CDD:275380 4/22 (18%)
LRR 4 126..147 6/23 (26%)
leucine-rich repeat 127..150 CDD:275380 6/25 (24%)
LRR 5 150..171 8/22 (36%)
leucine-rich repeat 151..174 CDD:275380 8/24 (33%)
LRR 6 174..195 9/20 (45%)
leucine-rich repeat 175..201 CDD:275380 9/25 (36%)
LRR 7 201..221 5/20 (25%)
leucine-rich repeat 224..275 CDD:275380 3/50 (6%)
LRR 8 275..296 6/20 (30%)
leucine-rich repeat 276..299 CDD:275380 6/22 (27%)
LRR 9 299..321 8/27 (30%)
leucine-rich repeat 300..322 CDD:275380 9/27 (33%)
LRR_8 321..382 CDD:290566 18/64 (28%)
LRR 10 322..343 6/24 (25%)
leucine-rich repeat 323..346 CDD:275380 6/26 (23%)
LRR_RI 345..>541 CDD:238064 54/217 (25%)
LRR 11 346..366 4/19 (21%)
leucine-rich repeat 347..371 CDD:275380 6/23 (26%)
LRR_8 371..432 CDD:290566 16/68 (24%)
LRR 12 371..391 7/19 (37%)
leucine-rich repeat 372..397 CDD:275380 8/32 (25%)
LRR 13 397..418 5/20 (25%)
leucine-rich repeat 398..421 CDD:275380 5/22 (23%)
LRR_8 420..481 CDD:290566 18/71 (25%)
LRR 14 421..442 5/20 (25%)
leucine-rich repeat 422..446 CDD:275380 6/23 (26%)
LRR 15 446..466 6/30 (20%)
leucine-rich repeat 447..470 CDD:275380 7/33 (21%)
LRR 16 470..493 7/22 (32%)
leucine-rich repeat 471..497 CDD:275380 8/26 (31%)
LRR_8 497..555 CDD:290566 18/60 (30%)
LRR 17 497..518 8/22 (36%)
leucine-rich repeat 498..521 CDD:275380 9/24 (38%)
LRR 18 521..544 6/23 (26%)
leucine-rich repeat 522..545 CDD:275380 6/23 (26%)
LRR 19 546..566 2/19 (11%)
LRRCT 577..626 CDD:214507 15/58 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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