DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tl and cd180

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_031762487.1 Gene:cd180 / 100489673 XenbaseID:XB-GENE-489949 Length:571 Species:Xenopus tropicalis


Alignment Length:566 Identity:129/566 - (22%)
Similarity:219/566 - (38%) Gaps:168/566 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 IVSPTTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEEM 188
            :|:|.    :|...|:.||    :.::|...|.|...|         |..|| ||.:...:...:
 Frog    29 VVTPV----QSTTPGLVIT----EVIYGTISFEFCFSR---------TFSRN-SHFQRAISAARL 75

  Fly   189 -PSHLFDDLENLE----SIEFGSNK-LRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSV 247
             |..|..:|.|::    .::|.|.| ||.:|               .|::.:.|.|         
 Frog    76 FPGPLALELINVKVDWAHVQFRSMKHLRPLP---------------VSHRQYCLVK--------- 116

  Fly   248 LGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRV------- 305
                 ..|.:..|.|..|..|..::.::|:......|.:.:|.:|.|||.:.|:.|.:       
 Frog   117 -----EINSLFALYHTTFMRLKCISPLDLTRCNINLLYEDVFQNNIHLNTLVLIGNPILYIAASA 176

  Fly   306 ---PLATLPSRLFANQPELQILRLRAELQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQV- 366
               |||.  ..||..|..|      ..:..:|   .||...:..:|.|:|.:.:|.   |.|.. 
 Frog   177 FNGPLAL--KHLFLQQIPL------TNVTFIP---LEHLQHLETLSFGNNFISSLQ---LPHNFP 227

  Fly   367 --NLLSLDLSNN--RLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNR-- 425
              ||..||..:|  ::......:...:.||: |.|:.|.:..|..:.|.:: ||.:|.:..||  
 Frog   228 IKNLRVLDFQSNCXKILAADVEILKQSNNLS-LILKGNDIEYIEPNSFDSV-NLYSLDLKGNRGD 290

  Fly   426 -LRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQIN---SPFGYMHGLLT---LNL-RN 482
             ...:.|.||.....::.|.|....:: ..|||..:..:::|   |....:.||.:   ||: |.
 Frog   291 LANLLSSTAFSCLTTIQRLDLTGTHVE-SLPLLKYLNLSRMNINASNENLLKGLESQTFLNMERP 354

  Fly   483 NSIIFVYNDWKNTMLQLRELDL--------------SYNNISSLGYEDL-----------AFLSQ 522
            .||..:|    |..||...|::              :::.::.|.||||           ||...
 Frog   355 PSIWELY----NIFLQALHLEVLILLSCNLTAIEHRAFHKLAKLQYEDLRHNKITIFSSNAFRDL 415

  Fly   523 NRLHVNMTHNKIRRIALPEDVHLGEGYNNNLVH-------VDLNDNPLVCDCTILWFIQLVRGVH 580
            :.:|:|...|.|..||            ::|:|       ::|:.||:.|.|             
 Frog   416 SHIHLNFASNMISDIA------------SHLLHNISGTSAINLSHNPIDCLC------------- 455

  Fly   581 KPQYSRQF----KLRTDRLV--CSQPNVLEGTPVRQIEPQTLICPL 620
               ::.||    |:..|:.:  |..|..:|||.:..::   |.|.|
 Frog   456 ---FNFQFLXNEKIFEDKSITLCGSPKSIEGTTLSALQ---LSCGL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 15/64 (23%)
leucine-rich repeat 176..198 CDD:275380 5/22 (23%)
leucine-rich repeat 199..222 CDD:275380 6/27 (22%)
LRR 222..576 CDD:443914 92/410 (22%)
leucine-rich repeat 223..270 CDD:275380 8/46 (17%)
leucine-rich repeat 271..294 CDD:275380 4/22 (18%)
leucine-rich repeat 295..320 CDD:275380 10/34 (29%)
leucine-rich repeat 321..343 CDD:275380 4/21 (19%)
leucine-rich repeat 344..367 CDD:275380 6/25 (24%)
leucine-rich repeat 368..391 CDD:275380 4/24 (17%)
leucine-rich repeat 392..415 CDD:275380 6/22 (27%)
leucine-rich repeat 416..439 CDD:275380 7/25 (28%)
leucine-rich repeat 440..474 CDD:275380 7/36 (19%)
leucine-rich repeat 475..498 CDD:275380 8/26 (31%)
leucine-rich repeat 499..520 CDD:275380 7/45 (16%)
leucine-rich repeat 523..552 CDD:275380 6/28 (21%)
LRRCT 561..619 CDD:214507 14/63 (22%)
LRRNT 631..667 CDD:214470
PPP1R42 <660..752 CDD:455733
leucine-rich repeat 664..693 CDD:275380
leucine-rich repeat 694..715 CDD:275380
leucine-rich repeat 716..737 CDD:275380
LRRCT 751..800 CDD:214507
TIR 858..996 CDD:214587
cd180XP_031762487.1 LRR 126..514 CDD:443914 99/422 (23%)
leucine-rich repeat 138..158 CDD:275380 4/19 (21%)
leucine-rich repeat 159..182 CDD:275380 5/22 (23%)
leucine-rich repeat 183..206 CDD:275380 7/33 (21%)
leucine-rich repeat 207..230 CDD:275380 6/25 (24%)
leucine-rich repeat 231..256 CDD:275380 4/24 (17%)
leucine-rich repeat 257..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..305 CDD:275380 7/25 (28%)
leucine-rich repeat 322..345 CDD:275380 5/22 (23%)
leucine-rich repeat 370..393 CDD:275380 1/22 (5%)
leucine-rich repeat 394..417 CDD:275380 7/22 (32%)
leucine-rich repeat 418..440 CDD:275380 8/33 (24%)
Blue background indicates that the domain is not in the aligned region.

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