DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6420 and WDR20

DIOPT Version :9

Sequence 1:NP_001287545.1 Gene:CG6420 / 43218 FlyBaseID:FBgn0039451 Length:909 Species:Drosophila melanogaster
Sequence 2:XP_011535637.1 Gene:WDR20 / 91833 HGNCID:19667 Length:634 Species:Homo sapiens


Alignment Length:931 Identity:313/931 - (33%)
Similarity:389/931 - (41%) Gaps:370/931 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANQLDASVKDDLKTQFVTREGTYRLLTLSEYSRPNRVGYSSNQSSPQVRVSMVTLPSPAQGKLG 65
            ||.:......:::||||.||||.|:||..|||||||||.::|..|:| ||||.|.|.        
Human     1 MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNP-VRVSFVNLN-------- 56

  Fly    66 SDVGVGTPVGGGTAGANTTTTNGSSPGASPTGAAGASTAISNGGAGGDYSHSNHNSNSAGNNTVE 130
                                                                             
Human    57 ----------------------------------------------------------------- 56

  Fly   131 ARLGGGISMHSMMNGGVVDQNGVATNQVLGGDRICFNFGRDLYVYSFRGAKK------------G 183
                              ||:|       .|||:|||.||:||.|.::|.:|            .
Human    57 ------------------DQSG-------NGDRLCFNVGRELYFYIYKGVRKVPTRASPEPASGA 96

  Fly   184 TEMSKPIDKKFYKGTNPSCHDFNISSATPTGAPLLVGFTTGQIQLVSPHVGPREVRKLFNEE--- 245
            .::||||||:.||||.|:|||||..:||.....|||||:.||:||:.|.  .:|..||||||   
Human    97 ADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPI--KKETSKLFNEENSC 159

  Fly   246 ----------------------------RLIDKTKVTCLKWLPNSPHLFLAAHASGHLYLYNEEL 282
                                        |||||::|||:||:|.|..|||.||:||::||||.|.
Human   160 QHLWKVDWNEERQNEGSKTSEEALVTVQRLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEH 224

  Fly   283 PCAATAPSYQPFKLGDGYTILTSKSKTTRNPLFKWVFSTDNCCVNEFCFSPCGSHLAVVSQDGFL 347
            .|..|||.||..|.|:.:.:.|.|||:|||||.||  :.....:|||.|||.|..||.|||||||
Human   225 TCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKW--TVGEGALNEFAFSPDGKFLACVSQDGFL 287

  Fly   348 RVFHYDTMELLGIARSYFGGFLCVCWSPDGKYIVVGGEDDLVTVWSLHERRVVARGQGHRSWVSV 412
            |||::|::||.|..:|||||.|||||||||||||.|||||||||||..:.||:|||.||:|||||
Human   288 RVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSV 352

  Fly   413 VAFDPYTTSYTNWDGGDFSDDENQMNEYSHSREARFSGDSTANGGFEGFDR-NSTPVHADRNGPH 476
            |||||||||....|..:||..:....:..|.                |.|| |||.....:    
Human   353 VAFDPYTTSVEEGDPMEFSGSDEDFQDLLHF----------------GRDRANSTQSRLSK---- 397

  Fly   477 SASFRSDASSAEKLMSYRLGSVSQDTQICLWDITEDVLRHPLVLRQPANSERAYLNGGVDEEAEA 541
                |:...|....::||.|||.||||:||||:|||:| .|   .||.:..|.:.|         
Human   398 ----RNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDIL-FP---HQPLSRARTHTN--------- 445

  Fly   542 EDGIKVIRPVAMSGQATGQQAESGSCSPTREAAGGGTGNGAGEHSNSSSSKFSTANCTISSQSSP 606
                                            ....|...||.:.||         .|....|.|
Human   446 --------------------------------VMNATSPPAGSNGNS---------VTTPGNSVP 469

  Fly   607 DDCDTEAATPASTSSNAGAGSVAGAGAVASTKQNNRNHGTGNSIKFPNCISATKSDSIDGGGGSG 671
            .......:.|.|..||||                                  :||..:||...||
Human   470 PPLPRSNSLPHSAVSNAG----------------------------------SKSSVMDGAIASG 500

  Fly   672 SGQRPSQTTSGYNSKTSNSSNKSSNSGSGFSAFNSLTQRLSNFSFLSSSEKKGAGYEGSHSTAHR 736
                                                   :|.|:.||..::|    |..|...|:
Human   501 ---------------------------------------VSKFATLSLHDRK----ERHHEKDHK 522

  Fly   737 QHRKAMSMLKSYNQHNHTGGHNNHSQSNNSSSSNFGHSSTLDSNAAGAIGSSSTAHSFGSLKLSR 801
            :                     |||         .||.|                        |:
Human   523 R---------------------NHS---------MGHIS------------------------SK 533

  Fly   802 SSHHSSLATAAHASGSAAGSGSGVSSFDPMQLIGTPACPRFDECPLLEPLVCKKIAHERLTALIF 866
            ||...:|.|.              :..||.:.:|||.|||.::.||||||:||||||||||.|||
Human   534 SSDKLNLVTK--------------TKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIF 584

  Fly   867 REDCFLTACQDGFIYTWARPG 887
            .|||.:||||:|||.||.|||
Human   585 LEDCIVTACQEGFICTWGRPG 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6420NP_001287545.1 WD40 <193..509 CDD:225201 169/347 (49%)
WD40 repeat 208..249 CDD:293791 21/71 (30%)
WD40 repeat 284..330 CDD:293791 21/45 (47%)
WD40 <297..417 CDD:295369 79/119 (66%)
WD40 repeat 369..404 CDD:293791 28/34 (82%)
WDR20XP_011535637.1 WD40 <190..>432 CDD:225201 143/268 (53%)
WD40 192..>357 CDD:295369 106/166 (64%)
WD40 repeat 196..261 CDD:293791 37/66 (56%)
WD40 repeat 266..302 CDD:293791 23/35 (66%)
WD40 repeat 309..342 CDD:293791 26/32 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151835
Domainoid 1 1.000 203 1.000 Domainoid score I2967
eggNOG 1 0.900 - - E2759_KOG2394
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32684
Inparanoid 1 1.050 467 1.000 Inparanoid score I1544
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49265
OrthoDB 1 1.010 - - D308422at33208
OrthoFinder 1 1.000 - - FOG0002009
OrthoInspector 1 1.000 - - otm41935
orthoMCL 1 0.900 - - OOG6_102737
Panther 1 1.100 - - O PTHR14107
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R157
SonicParanoid 1 1.000 - - X1319
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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