DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6420 and zmp:0000000529

DIOPT Version :9

Sequence 1:NP_001287545.1 Gene:CG6420 / 43218 FlyBaseID:FBgn0039451 Length:909 Species:Drosophila melanogaster
Sequence 2:XP_009290280.3 Gene:zmp:0000000529 / 571996 ZFINID:ZDB-GENE-130530-532 Length:639 Species:Danio rerio


Alignment Length:908 Identity:331/908 - (36%)
Similarity:420/908 - (46%) Gaps:281/908 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SVKD--DLKTQFVTREGTYRLLTLSEYSRPNRVGYSSNQSSPQVRVSMVTLPSPAQGKLGSDVGV 70
            ::||  ::|:||.||||.|:|||||:                                  |....
Zfish     7 ALKDINEIKSQFRTREGFYKLLTLSD----------------------------------SQQRA 37

  Fly    71 GTPVG--GGTAGANTTTTNGSSPGASPTGAAGASTAISNGGAGGDYSHSNHNSNSAGNNTVEARL 133
            |.|.|  |.||||      ||.||    ||||....:...||.         :||:.......| 
Zfish    38 GLPRGPTGVTAGA------GSIPG----GAAGVGGLVQGPGAA---------ANSSPGFLPPVR- 82

  Fly   134 GGGISMHSMMNGGVVDQNGVATNQVLGGDRICFNFGRDLYVYSFRGAKKGTEMSKPIDKKFYKGT 198
               :||..:......:::          :|:|||.||:||.|::...||..::||||||:.||||
Zfish    83 ---VSMVKLKPEDPSEES----------ERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGT 134

  Fly   199 NPSCHDFNISSATPTGAPLLVGFTTGQIQLVSPHVGPREVRKLFNEERLIDKTKVTCLKWLPNSP 263
            .|:|||||..|||.....|:|||:.||:|.:.|.  .:|..|||||||||||:|||||||||.|.
Zfish   135 QPTCHDFNQFSATADSVALIVGFSAGQVQYLDPI--KKETSKLFNEERLIDKSKVTCLKWLPKSE 197

  Fly   264 HLFLAAHASGHLYLYNEELPCAATAPSYQPFKLGDGYTILTSKSKTTRNPLFKWVFSTDNCCVNE 328
            :||||:||||||||||.|.||..|||.|...:.|:|:::.:.|:||.||||.:||.....  :||
Zfish   198 NLFLASHASGHLYLYNVEHPCGTTAPQYCLLRQGEGFSVYSCKTKTPRNPLLRWVVGEGG--LNE 260

  Fly   329 FCFSPCGSHLAVVSQDGFLRVFHYDTMELLGIARSYFGGFLCVCWSPDGKYIVVGGEDDLVTVWS 393
            |.|||.|.|:|.|.|||.|||||:|:|||.|:.:|||||.|||.|||||||:..|||||||||||
Zfish   261 FAFSPDGVHVACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWS 325

  Fly   394 LHERRVVARGQGHRSWVSVVAFDPYTTSYTNWDGGDFSDDENQMNEYSHSREARFSGDSTANGGF 458
            ..|.||||||.||:|||:||||||:||:.         :||..| |.|.|       |.....|.
Zfish   326 FSESRVVARGHGHKSWVNVVAFDPFTTNL---------EDEEPM-ELSGS-------DEDLQQGA 373

  Fly   459 EGFDRNSTPVHADRNGPHSASFRSDASSAEKLMSYRLGSVSQDTQICLWDITEDVL--RHPLVLR 521
            ..|.|..|.....|...||:  :..|:|    :|||.|||.||||.||||:|:|||  |.||   
Zfish   374 LHFGRVRTSSTLSRLSRHSS--KGGAAS----VSYRFGSVGQDTQFCLWDLTDDVLYPRLPL--- 429

  Fly   522 QPANSERAYLNGGVDEEAEAEDGIKVIRPVAMSGQATGQQAESGSCSPTREAAGGGTGNGAGEHS 586
                 .||..|                                 :..||  .|...:|:....|.
Zfish   430 -----SRALTN---------------------------------TFGPT--VATSNSGSVVEGHH 454

  Fly   587 NSSSSKFSTANCTISSQSSPDDCDTEAATPASTSSNAGAGSVAGAGAVASTKQNNRNHGTGNSIK 651
            :.|....||....:               |.|.|.:                         ||:.
Zfish   455 HPSIQTASTLPLPL---------------PRSLSRS-------------------------NSLP 479

  Fly   652 FPNCISATKSDSIDGGGGSGSGQRPSQTTSGYNSKTSNSSNKSSNSGSGFSAFNSLTQRLSNFSF 716
            .|...:.:||.    |....:|             |.:||...:....|..|..||.:|      
Zfish   480 HPAVANTSKSQ----GAPESTG-------------TVSSSGTVTPFSIGRFATLSLQER------ 521

  Fly   717 LSSSEKKGAGYEGSHSTAHRQHRKAMSMLKSYNQHNHTGGHNNHSQSNNSSSSNFGHSSTLDSNA 781
              .|:|.|.|.|..|              |.|                                 
Zfish   522 --KSDKSGVGGEKEH--------------KRY--------------------------------- 537

  Fly   782 AGAIGSSSTAHSFGSLKLSRSSHHSSLATAAHASGSAAGSGSGVSSFDPMQLIGTPACPRFDECP 846
                      ||.|:  :|:|:...::|..:             |..|..:::||..|||.:|.|
Zfish   538 ----------HSLGN--ISKSNDKINVAPRS-------------SRLDGAKVLGTTLCPRMNEVP 577

  Fly   847 LLEPLVCKKIAHERLTALIFREDCFLTACQDGFIYTWARPGHATHATQHLSPGQAAAPGGTVI 909
            ||||||||||||||||.|:|..||.:||||:|.|.|||||| .|||:|.||.....:|.|||:
Zfish   578 LLEPLVCKKIAHERLTVLVFMNDCIITACQEGLICTWARPG-KTHASQPLSAQNGNSPSGTVV 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6420NP_001287545.1 WD40 <193..509 CDD:225201 173/315 (55%)
WD40 repeat 208..249 CDD:293791 20/40 (50%)
WD40 repeat 284..330 CDD:293791 18/45 (40%)
WD40 <297..417 CDD:295369 76/119 (64%)
WD40 repeat 369..404 CDD:293791 27/34 (79%)
zmp:0000000529XP_009290280.3 WD40 repeat 141..177 CDD:293791 16/37 (43%)
WD40 184..450 CDD:330360 156/333 (47%)
WD40 repeat 188..253 CDD:293791 39/64 (61%)
WD40 repeat 258..294 CDD:293791 23/35 (66%)
WD40 repeat 301..334 CDD:293791 25/32 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586397
Domainoid 1 1.000 267 1.000 Domainoid score I1829
eggNOG 1 0.900 - - E2759_KOG2394
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 470 1.000 Inparanoid score I1477
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D308422at33208
OrthoFinder 1 1.000 - - FOG0002009
OrthoInspector 1 1.000 - - otm26210
orthoMCL 1 0.900 - - OOG6_102737
Panther 1 1.100 - - LDO PTHR14107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1319
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.760

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