DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6420 and bun62

DIOPT Version :9

Sequence 1:NP_001287545.1 Gene:CG6420 / 43218 FlyBaseID:FBgn0039451 Length:909 Species:Drosophila melanogaster
Sequence 2:NP_594635.1 Gene:bun62 / 2542950 PomBaseID:SPAC12B10.03 Length:543 Species:Schizosaccharomyces pombe


Alignment Length:612 Identity:148/612 - (24%)
Similarity:230/612 - (37%) Gaps:190/612 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FVT-REGTYRLLTLSEYSRPNRVGYSSNQSSPQVRVSMVTLPSPAQGKLGSDVGVGTPVG----- 75
            |:| |||.|.|  ..|:    ::| ||::|:||:              .||.:...|||.     
pombe    14 FLTAREGEYVL--KDEF----QLG-SSSRSTPQI--------------TGSPLDPNTPVKRLFFM 57

  Fly    76 ----------------------GGTAGANTTTTNGSSPGASPTGAAGASTAISNGGAGGDYSHSN 118
                                  ....|.:....|...|           :.:.|      |.:|.
pombe    58 RINIAQFSRWDYPYPREYIEELKKIHGVHHVEENRDVP-----------SILEN------YRNSK 105

  Fly   119 HNS-NSAGNNTVEARL------GGG--ISMHSMMNGGVVDQNGVATNQ--VLGGDRICFNFGRDL 172
            ..| |.:.:||...:|      .|.  |:..|.::......|.|.:.|  :.|...:..|..:..
pombe   106 RKSHNFSSSNTPYLKLHRPASRAGAPLINAKSFISSLTFHDNIVRSFQPSIHGKTFVFANHEKSF 170

  Fly   173 YVYSFRGAKKGTEMSKPIDKKFYKGTNPSCHDFNISSATPTGAPLLVGFTTGQIQLVSPHVGPRE 237
            |......|...:.:.    |..:...:|.|||.|..:.:|.|..:::||.||.:....| :..:.
pombe   171 YWLDVSAANSHSALL----KMEFPRASPVCHDINSFTKSPKGLDVIIGFDTGDVLWYDP-INFKY 230

  Fly   238 VRKLFNEERLIDKTKVTCLKWLPNSPHLFLAAHASGHLYLYNE---ELPCAATAPSYQPFKL--- 296
            :|  ||:...::.:.||.:||:......||.:..:|.|.||::   |.|.....|......|   
pombe   231 LR--FNKNGQLNSSSVTAIKWVAGKDSQFLVSFRNGWLVLYDKYRHEQPLHIVVPEKNLKSLYLS 293

  Fly   297 GDG-YTILTS---KSKTTRNPLFKWVFSTDNCCVNEFCFSPCGSHLAVVSQDGFLRVFHYDTMEL 357
            ..| :.||.|   :.....||:..:.||...  :|.|||||...:||:||:.|.|::|.:....:
pombe   294 SPGTFNILISINHRDDRKLNPVACYAFSKSP--INGFCFSPDYQYLALVSERGTLKLFDFVKEHV 356

  Fly   358 LGIARSYFGGFLCVCWSPDGKYIVVGGEDDLVTVWSLHERRVVARGQGHRSWVSVVAFDPYTTSY 422
            |.:..|||.|..||.||||||:|.:||:||||:::|...|::|||.|||:|||:.|.||.:.   
pombe   357 LDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSFPLRKLVARCQGHKSWVTDVIFDAWR--- 418

  Fly   423 TNWDGGDFSDDENQMNEYSHSREARFSGDSTANGGFEGFDRNSTPVHADRNGPHSASFRSDASSA 487
                    .||:|                                                    
pombe   419 --------CDDDN---------------------------------------------------- 423

  Fly   488 EKLMSYRLGSVSQDTQICLWDITEDVLRHP-----LVLRQPANSERA------------------ 529
                 ||:.||..|.::.|||.:...:..|     .|.....||:.|                  
pombe   424 -----YRIASVGLDRKLLLWDFSVSAIHRPKSAVYYVNHHSNNSKPAISDFDDVGDLTMGSEIDN 483

  Fly   530 --YLNGGVD-EEAEAEDGIKVIRPVAM 553
              |:||.:. ....:...|.||.|:.:
pombe   484 SNYVNGDITIHPTLSRSLIPVISPITI 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6420NP_001287545.1 WD40 <193..509 CDD:225201 94/325 (29%)
WD40 repeat 208..249 CDD:293791 10/40 (25%)
WD40 repeat 284..330 CDD:293791 11/52 (21%)
WD40 <297..417 CDD:295369 54/123 (44%)
WD40 repeat 369..404 CDD:293791 20/34 (59%)
bun62NP_594635.1 WD40 89..522 CDD:225201 128/516 (25%)
WD40 <322..541 CDD:295369 70/259 (27%)
WD40 repeat 368..404 CDD:293791 20/35 (57%)
WD40 repeat 409..445 CDD:293791 15/103 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2394
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I1132
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002009
OrthoInspector 1 1.000 - - oto101830
orthoMCL 1 0.900 - - OOG6_102737
Panther 1 1.100 - - LDO PTHR14107
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R157
SonicParanoid 1 1.000 - - X1319
TreeFam 00.000 Not matched by this tool.
109.890

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