DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6420 and Dmwd

DIOPT Version :10

Sequence 1:NP_651499.2 Gene:CG6420 / 43218 FlyBaseID:FBgn0039451 Length:909 Species:Drosophila melanogaster
Sequence 2:NP_034188.2 Gene:Dmwd / 13401 MGIID:94907 Length:665 Species:Mus musculus


Alignment Length:927 Identity:320/927 - (34%)
Similarity:398/927 - (42%) Gaps:311/927 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLKTQFVTREGTYRLLTLSEYSRPNRVGYSSNQSSPQVRVSMVTLPSPAQGKLGSDVGVGTPVGG 76
            ::|:||.||||.|:||.          |.::.:|.|    :....|:|.|               
Mouse    21 EIKSQFRTREGFYKLLP----------GDATRRSGP----TSAQTPAPPQ--------------- 56

  Fly    77 GTAGANTTTTNGSSPGASPTGAAGASTAISNGGAGGDYSHSNHNSNSAGNNTVEARLGGGISMHS 141
                          |...|.|.|.|    |..||.|..|.........|......||       |
Mouse    57 --------------PTQPPPGPAAA----SGPGAAGPASSPPPAGPGPGPALPAVRL-------S 96

  Fly   142 MMNGGVVDQNG----VATNQVLGGDRICFNFGRDLYVY---SFRGAKKGTEMSKPIDKKFYKGTN 199
            ::..|..|..|    ..:....||||:|||.||:||.|   ...|:::..:::|||||:.||||.
Mouse    97 LVRLGDPDGAGEPPSTPSGLGAGGDRVCFNLGRELYFYPGCCRSGSQRSIDLNKPIDKRIYKGTQ 161

  Fly   200 PSCHDFNISSATPTGAPLLVGFTTGQIQLVSPHVGPREVRKLFNEERLIDKTKVTCLKWLPNSPH 264
            |:|||||..:|......|||||:.||:|.:.  :..::..|||||||||||||||.|||||.|..
Mouse   162 PTCHDFNQFTAATETISLLVGFSAGQVQYLD--LIKKDTSKLFNEERLIDKTKVTYLKWLPESES 224

  Fly   265 LFLAAHASGHLYLYNEELPCAATAPSYQPFKLGDGYTILTSKSKTTRNPLFKWVFSTDNCCVNEF 329
            ||||:||||||||||...||.:|.|.|...|.|:|:.:..:|||..||||.||......  :|||
Mouse   225 LFLASHASGHLYLYNVSHPCTSTPPQYSLLKQGEGFAVYAAKSKAPRNPLAKWAVGEGP--LNEF 287

  Fly   330 CFSPCGSHLAVVSQDGFLRVFHYDTMELLGIARSYFGGFLCVCWSPDGKYIVVGGEDDLVTVWSL 394
            .|||.|.|||.|||||.|||||:|:|.|.|:.:|||||.|||||||||:|:|.|||||||||||.
Mouse   288 AFSPDGRHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSF 352

  Fly   395 HERRVVARGQGHRSWVSVVAFDPYTTSYTNWDGGDFSDDENQMNEYSHSREARFSGDSTANGGFE 459
            .|.||||||.||:|||:.||||||||                        .|..:..::|:|...
Mouse   353 TEGRVVARGHGHKSWVNAVAFDPYTT------------------------RAEEAASASADGDPS 393

  Fly   460 GFDRNSTPVHADRNGPHSASFRSDASSAEKLMSYRLGSVSQDTQICLWDITEDVLR-HPLVLRQP 523
            |.:.......:|...|.|...::.:      ::||.||..||||.||||:|||||. ||.:.|  
Mouse   394 GEEEEPEVTSSDTGAPVSPLPKAGS------ITYRFGSAGQDTQFCLWDLTEDVLSPHPSLAR-- 450

  Fly   524 ANSERAYLNGGVDEEAEAEDGIKVIRPVAMSGQATGQQAESGSCSPTREAAGGGTGNGAGEHSNS 588
                                                          ||...|             
Mouse   451 ----------------------------------------------TRTLPG------------- 456

  Fly   589 SSSKFSTANCTISSQSSPDDCDTEAAT-PASTSSNAGAGSVAGAGAVASTKQNNRNHGTGNSIKF 652
                                  |..|| |||.||.||.   .|||.:.      |:....||:..
Mouse   457 ----------------------TPGATPPASGSSRAGE---TGAGPLP------RSLSRSNSLPH 490

  Fly   653 PNCISATKSDSIDGGGGSGSGQRPSQTTSGYNSKTSNSSNKSSNSGSGFSAFNSLTQRLSNFSFL 717
            |            .|||...|  ||               .|...|..||        :..|:.|
Mouse   491 P------------AGGGKAGG--PS---------------ASMEPGIPFS--------IGRFATL 518

  Fly   718 SSSEKKGAGYEGSHSTAHRQHRKAMSMLKSYNQHNHTGGHNNHSQSNNSSSSNFGHSSTLDSNAA 782
            :..|::..|.|..|              |.|           ||..|.|...:.|:||       
Mouse   519 TLQERRDRGAEKEH--------------KRY-----------HSLGNISRGGSGGNSS------- 551

  Fly   783 GAIGSSSTAHSFGSLKLSRSSHHSSLATAAHASGSAAGSGSGVSSFDPMQLIGTPACPRFDECPL 847
                         :.|||..:..|.|                    ||.:::||..|||..|.||
Mouse   552 -------------NDKLSGPAPRSRL--------------------DPAKVLGTALCPRIHEVPL 583

  Fly   848 LEPLVCKKIAHERLTALIFREDCFLTACQDGFIYTWARPGHA-THATQHLSPGQA---------- 901
            ||||||||||.||||.|:|.|||.:||||:|.|.||||||.| |........|||          
Mouse   584 LEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARPGKAFTDEETEAQAGQASWPRSPSKSV 648

  Fly   902 ---------AAPGGTVI 909
                     ::|.|||:
Mouse   649 VEGISSQPGSSPSGTVV 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6420NP_651499.2 WD40 repeat 208..249 CDD:293791 17/40 (43%)
WD40 repeat 284..330 CDD:293791 18/45 (40%)
WD40 <298..417 CDD:441893 76/118 (64%)
WD40 repeat 369..404 CDD:293791 28/34 (82%)
DmwdNP_034188.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91 27/116 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 3/18 (17%)
WD 1. /evidence=ECO:0000255 208..248 29/39 (74%)
WD40 repeat 214..254 CDD:293791 26/39 (67%)
WD40 repeat 259..319 CDD:293791 34/61 (56%)
WD40 <273..375 CDD:441893 70/103 (68%)
WD 2. /evidence=ECO:0000255 279..318 23/40 (58%)
WD 3. /evidence=ECO:0000255 321..360 31/38 (82%)
WD40 repeat 327..360 CDD:293791 26/32 (81%)
WD 4. /evidence=ECO:0000255 363..445 37/111 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..413 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 446..506 29/180 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 524..564 16/84 (19%)
WD 5. /evidence=ECO:0000255 592..629 25/36 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 628..665 6/36 (17%)

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