DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yif1 and YIF1B

DIOPT Version :9

Sequence 1:NP_651498.1 Gene:Yif1 / 43217 FlyBaseID:FBgn0039450 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001034761.1 Gene:YIF1B / 90522 HGNCID:30511 Length:314 Species:Homo sapiens


Alignment Length:377 Identity:149/377 - (39%)
Similarity:204/377 - (54%) Gaps:77/377 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SSAAGRPR----PPKRVSDVNAMGPSAPMMGGGATFMAPPTGPGILDPNMYGAPAPAPVNSYGFD 77
            ::|||.||    |.||                    ..|.:.||:.||:..            ||
Human     8 AAAAGTPRLRKWPSKR--------------------RIPVSQPGMADPHQL------------FD 40

  Fly    78 PNLGQPSQHIQQPPQQQPGYGYGAPPPQQAAGPPTYGIGAPQPVAPPTGQYPQFAMFQQPIVQDM 142
            ......|:            ||||   |:|.|      |...|.|.||   |..|....| |.:|
Human    41 DTSSAQSR------------GYGA---QRAPG------GLSYPAASPT---PHAAFLADP-VSNM 80

  Fly   143 AMQYGQKLADQGKQIMENQFEKWVPVAKLKYYFAVDNAYVGRKLRLLFFPYMHKDWSLRYDQEHP 207
            ||.||..||.|||::::...::::|:.|||||||||..||||||.||||||:|:||.::|.|:.|
Human    81 AMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTP 145

  Fly   208 VQPRYDVNAPDLYLPTMGYITYVIVAGLLLGMQKRFSPEQLGIQASSAMAYSIFELVIYSLALYV 272
            |.||:||||||||:|.|.:||||:||||.||.|.||||:.||:|||||:|:...|::...|:||:
Human   146 VAPRFDVNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYL 210

  Fly   273 MNVKTSLKTLDLLAFTGYKYVNIVVCLMVSTLFFKSGYYIALAYTSFSFGFFMLRTLRTKLLQDN 337
            :.|.|.|.|:||:||.|||||.::..:::..||.|.|||:.|.:...:...||:||||.|:|.| 
Human   211 VTVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKILAD- 274

  Fly   338 SPAAPSGAINYDPYGNPQQFDYSGGKKR-KLYFLFMIVAGQALFAFLLSKHL 388
              ||..|.            ...|.:.: ::|....:.|.|.:..:.|:.||
Human   275 --AAAEGV------------PVRGARNQLRMYLTMAVAAAQPMLMYWLTFHL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yif1NP_651498.1 YIF1 142..383 CDD:281822 114/241 (47%)
YIF1BNP_001034761.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 21/93 (23%)
YIF1 80..307 CDD:281822 114/241 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152363
Domainoid 1 1.000 235 1.000 Domainoid score I2373
eggNOG 1 0.900 - - E1_COG5197
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H60114
Inparanoid 1 1.050 247 1.000 Inparanoid score I3264
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55435
OrthoDB 1 1.010 - - D1256839at2759
OrthoFinder 1 1.000 - - FOG0002277
OrthoInspector 1 1.000 - - otm41325
orthoMCL 1 0.900 - - OOG6_101876
Panther 1 1.100 - - LDO PTHR14083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1884
SonicParanoid 1 1.000 - - X1506
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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