DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yif1 and yif1a

DIOPT Version :9

Sequence 1:NP_651498.1 Gene:Yif1 / 43217 FlyBaseID:FBgn0039450 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_956225.1 Gene:yif1a / 334982 ZFINID:ZDB-GENE-030131-6922 Length:307 Species:Danio rerio


Alignment Length:322 Identity:130/322 - (40%)
Similarity:191/322 - (59%) Gaps:45/322 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 QQQPGYGYGAPPPQQAAGPPTYG-------IGAPQPV--------------APPTGQYPQFA-MF 134
            |||   ||.|..|:..|.|||.|       ...|.|:              .|..||.|... :|
Zfish     4 QQQ---GYRATKPRARASPPTGGPMLFDDTSSGPPPMNNQNYYSSGYNMAEMPAGGQEPGVGNIF 65

  Fly   135 QQPIVQDMAMQYGQKLADQGKQIMENQFEKWVPVAKLKYYFAVDNAYVGRKLRLLFFPYMHKDWS 199
            ..|:. :.||.||..||:|||.|:..:..:::.|.||||:||||..||.:||.||.|||.|:||.
Zfish    66 ADPMA-NAAMMYGSTLANQGKDIVNKEINRFMSVNKLKYFFAVDTKYVMKKLLLLMFPYTHQDWE 129

  Fly   200 LRYDQEHPVQPRYDVNAPDLYLPTMGYITYVIVAGLLLGMQKRFSPEQLGIQASSAMAYSIFELV 264
            :||.::.|:.||:||||||||:|||.:|||:::||:.||:|||||||.||:.||:|:.:.|.|::
Zfish   130 VRYHRDTPLTPRHDVNAPDLYIPTMAFITYILLAGMALGIQKRFSPEVLGLCASTALVWMIIEVL 194

  Fly   265 IYSLALYVMNVKTSLKTLDLLAFTGYKYVNIVVCLMVSTLFFKSGYYIALAYTSFSFGFFMLRTL 329
            :..|:||::.|.|.|.|.||:|::|||||.:::.:....||...|||:|||::|.:..||::|:|
Zfish   195 VMLLSLYLLTVHTDLSTFDLVAYSGYKYVGMILTVFCGLLFGSDGYYVALAWSSCALMFFIVRSL 259

  Fly   330 RTKLLQDNSPAAPSGAINYDPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFL---LSKHL 388
            :.|:|         .:|:.|..|       :|...:..:.|::.||..|...|:   |:.||
Zfish   260 KMKIL---------SSISADSMG-------AGASAKPRFRLYITVASAAFQPFIIYWLTAHL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yif1NP_651498.1 YIF1 142..383 CDD:281822 106/240 (44%)
yif1aNP_956225.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 14/40 (35%)
YIF1 73..300 CDD:281822 107/242 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586853
Domainoid 1 1.000 235 1.000 Domainoid score I2300
eggNOG 1 0.900 - - E1_COG5197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 238 1.000 Inparanoid score I3336
OMA 1 1.010 - - QHG55435
OrthoDB 1 1.010 - - D1256839at2759
OrthoFinder 1 1.000 - - FOG0002277
OrthoInspector 1 1.000 - - otm26046
orthoMCL 1 0.900 - - OOG6_101876
Panther 1 1.100 - - O PTHR14083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1884
SonicParanoid 1 1.000 - - X1506
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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