Protein Alignment Yif1 and Yif1b

DIOPT Version :10

• Sequence 1: NP_651498.1
• Gene: Yif1 / 43217
• FlyBaseID: FBgn0288631
• Length: 402
• Species: Drosophila melanogaster
• Sequence 2: NP_942029.2
• Gene: Yif1b / 292768
• RGDID: 735199
• Length: 311
• Species: Rattus norvegicus
• Alignment Length: 377
• Identity: 142/377 - (37%)
• Similarity: 200/377 - (53%)
• Gaps: 79/377 - (20%)

  Fly    17 SSAAGRPR----PPKRVSDVNAMGPSAPMMGGGATFMAPPTGPGILDPNMYGAPAPAPVNSYGFD 77
            ::.||.||    |.||                    ..|.:.||:.||:.:            ||
  Rat     7 AAPAGTPRLRKWPSKR--------------------RVPVSQPGMADPHQF------------FD 39

  Fly    78 PNLGQPSQHIQQPPQQQPGYGYGAPPPQQAAGPPTYGIGAPQPVAPPTGQYPQFAMFQQPIVQDM 142
            .....||:            |||..|...:.|.||....|....||               :.:|
  Rat    40 DTSSAPSR------------GYGGQPSPGSLGYPTSSSEAAFLAAP---------------MSNM 77

  Fly   143 AMQYGQKLADQGKQIMENQFEKWVPVAKLKYYFAVDNAYVGRKLRLLFFPYMHKDWSLRYDQEHP 207
            ||.||..||.|||::::...::::||:|||||||||..|||:||.||.|||:|:||.::|.|:.|
  Rat    78 AMAYGSSLAAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQDTP 142

  Fly   208 VQPRYDVNAPDLYLPTMGYITYVIVAGLLLGMQKRFSPEQLGIQASSAMAYSIFELVIYSLALYV 272
            |.||:|:||||||:|.|.:|||::||||.||.|.||||:.||:|||||:|:...|:|...|:||:
  Rat   143 VAPRFDINAPDLYIPAMAFITYILVAGLALGTQDRFSPDLLGLQASSALAWLTLEVVAILLSLYL 207

  Fly   273 MNVKTSLKTLDLLAFTGYKYVNIVVCLMVSTLFFKSGYYIALAYTSFSFGFFMLRTLRTKLLQDN 337
            :.|.|.|.|:||:||.|||||.::..::...||.|.|||:.||:...|...||:||||.|:|
  Rat   208 VTVNTDLTTIDLVAFLGYKYVGMIGGVLTGLLFGKIGYYLVLAWCCVSIFVFMIRTLRLKIL--- 269

  Fly   338 SPAAPSGAINYDPYGNPQQFDYSGGKKR-KLYFLFMIVAGQALFAFLLSKHL 388
            :.||..|.            ...|.:.: ::|....:.|.|.:..:.|:.||
  Rat   270 AQAAAEGV------------PVRGARNQLRMYLTMAVAAAQPVLMYWLTFHL 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Yif1	NP_651498.1	YIF1	135..385	CDD:461081	113/250 (45%)
Yif1b	NP_942029.2	YIF1	73..306	CDD:461081	114/262 (44%)