DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amon and fras1

DIOPT Version :9

Sequence 1:NP_477318.1 Gene:amon / 43215 FlyBaseID:FBgn0023179 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_005165392.1 Gene:fras1 / 563428 ZFINID:ZDB-GENE-060526-68 Length:4003 Species:Danio rerio


Alignment Length:630 Identity:120/630 - (19%)
Similarity:203/630 - (32%) Gaps:232/630 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 RVKRGLRPAVPAIHGMKFDLKVGEGNRIDEEPTDPYFPMQWYLKNTGQNGGKVRL------DLNV 177
            |.|.|  |.|....|::  |..|..::|.|:          :||.|..:...::|      ||:|
Zfish  2071 RKKEG--PRVTINRGLQ--LAAGSSSKITEQ----------HLKGTDIDSDNLKLRFTLIKDLSV 2121

  Fly   178 QAAWAQGITGKN---------VTTAIMDD----GVDYMHPDLKFNYNAEASYDFSSNDPFPYPRY 229
            .:...:  ||:|         ||:...||    .|:|:|.  |.......|:.|:..||      
Zfish  2122 GSLMLK--TGRNKARVSVKGPVTSFTQDDINKGHVEYIHE--KGESGGSFSFKFNLEDP------ 2176

  Fly   230 TDDWFNSHGTRCAGE---VAAARD----NGICGVGVAYD----SKIAGI---------------- 267
                   .|.|...:   ::...|    ..:...|:..|    .||..:                
Zfish  2177 -------EGNRVIDQSFFISVLEDRLPPTVVVNKGLVLDENSLKKITTLQLSSTDQDSEPDELVY 2234

  Fly   268 RMLDQPYMTDLIEANSMG-------------------H-EPHKIHIYSASWGPTDDGKTVDGPRN 312
            |:..||.:..|..:|..|                   | ...:||....::..:|.|..|.....
Zfish  2235 RITKQPQLGHLEHSNKPGTRISSFTQADLASRSIQYVHTSEDEIHSDDFTFTVSDGGNEVSQTFY 2299

  Fly   313 ATMRAI--------VQG--VNEG-RNGLGNIYVWASGDGGEEDDCNCDGYAASMWTISINSAIND 366
            .|:|.:        |.|  |.|| |..:....:.|:....|||..          |.:|..|...
Zfish  2300 ITIRPVDDALPVLQVPGMRVQEGVRKTITEFELKATDADTEEDSV----------TFTIVQAPRH 2354

  Fly   367 G------QNAHYDESCSSTLASTF----------SNGAKDPNT---GVATTDLY-----GKCTTT 407
            |      ...||.::.:.|:...:          ||..||..|   |..|...:     ||...|
Zfish  2355 GTIERTSNGQHYRQTNTFTMDDVYQNRISYNHDGSNSLKDRFTFTVGDGTNMFFIIEEGGKEVVT 2419

  Fly   408 HSGTSAAAPEAAGVFALAL-EANPQL-TWRDIQHLTVLTSKRNSLFDAKNRFHWTMNGVGLEFNH 470
                  |||:...:..|.: :..|:: |...:|.|..:.:|..:|...|..|             
Zfish  2420 ------AAPQKFKIDILPVDDGTPRIVTNLGLQWLEYMENKATNLISKKELF------------- 2465

  Fly   471 LFGFGVLDAGAMVTLSKQWHSVPPRYHCEAGELTQPQAIVMGRSLFWEIKTDACKG-TDTEVNYL 534
                                ::.|  ..:.|:||            :||.|:|..| .::::|..
Zfish  2466 --------------------TIDP--DTDDGQLT------------YEITTEAKHGYLESKLNPG 2496

  Fly   535 EHVQAVISANASRRGDLELFLTSPMGTKSMILSRRANDDDHRDGFTKWPFMTTHSWGEYPQGT-- 597
            :.:.:...|:.:            :|....:||    :|:.::....:.|:...|........  
Zfish  2497 KPITSFTQADIN------------LGLIRYVLS----EDNVQETMDNFKFLVKDSKPNIVSDNVF 2545

  Fly   598 ---WKL----EARFNSPQ---------TRHGNLLEWSLVLHGTKE 626
               |.|    ...||..:         .|.|||.::::||..|::
Zfish  2546 HIQWSLISFEHKSFNVSEKDGTVAVTVKRTGNLNQYAIVLCRTEQ 2590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amonNP_477318.1 S8_pro-domain 43..122 CDD:293079 1/2 (50%)
Peptidases_S8_Protein_convertases_Kexins_Fur in-like 150..446 CDD:173789 78/398 (20%)
Peptidase_S8 187..459 CDD:278510 74/368 (20%)
Peptidases_S8_S53 <409..485 CDD:299169 12/77 (16%)
P_proprotein 534..621 CDD:279782 15/104 (14%)
fras1XP_005165392.1 VWC 26..85 CDD:278520
VWC 93..150 CDD:278520
VWC 157..214 CDD:278520
VWC 219..276 CDD:278520
VWC 283..340 CDD:278520
VWC 364..414 CDD:302663
FU 419..465 CDD:238021
Furin-like_2 424..512 CDD:292535
FU 461..503 CDD:214589
FU 507..551 CDD:214589
GF_recep_IV 512..669 CDD:291509
FU 555..597 CDD:214589
Furin-like 588..762 CDD:279142
FU 602..645 CDD:214589
FU 648..700 CDD:214589
FU 704..748 CDD:214589
Furin-like 737..911 CDD:279142
FU 754..796 CDD:214589
FU 855..897 CDD:214589
Furin-like 888..1054 CDD:279142
FU 950..994 CDD:214589
FU 1044..1086 CDD:214589
Cadherin_3 <1097..1196 CDD:292802
Cadherin_3 1166..1306 CDD:292802
Cadherin_3 1406..1538 CDD:292802
Cadherin_3 1526..1689 CDD:292802
Cadherin_3 1658..1811 CDD:292802
Cadherin_3 1777..1934 CDD:292802
Cadherin_3 1901..2056 CDD:292802
Cadherin_3 2025..2175 CDD:292802 30/121 (25%)
Cadherin_3 2144..2290 CDD:292802 26/160 (16%)
Cadherin_3 2258..2403 CDD:292802 31/154 (20%)
Cadherin_3 2372..2534 CDD:292802 39/230 (17%)
Calx-beta 2550..2647 CDD:295344 10/41 (24%)
Calx-beta 2672..2771 CDD:295344
Calx-beta 2795..2891 CDD:295344
Calx-beta 2917..3008 CDD:295344
Calx-beta 3036..3130 CDD:295344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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