DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amon and Fras1

DIOPT Version :9

Sequence 1:NP_477318.1 Gene:amon / 43215 FlyBaseID:FBgn0023179 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_038947596.1 Gene:Fras1 / 289486 RGDID:1306516 Length:4014 Species:Rattus norvegicus


Alignment Length:544 Identity:103/544 - (18%)
Similarity:179/544 - (32%) Gaps:147/544 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSGPAVFTSSFL--------VRFRRGVDNSFAHDVADKYGFDNLGPLVGADG-HEYHFKHRTLPH 89
            ::.|.:..|||.        |::   |.:|....::|.:.|      |.:|| ||          
  Rat  2253 VASPGIQISSFTQADLTSRNVQY---VHSSGTGKLSDAFSF------VLSDGLHE---------- 2298

  Fly    90 ARSRRSLTHTRALKSHPAVHT--AVQQPGFKRVKRGLRPAV-----------------------P 129
                  :|.|.::..||...:  .||..|. ||:.|:|..:                       |
  Rat  2299 ------VTQTFSITIHPVDDSLPLVQNRGM-RVQEGVRKTITEFELKAVDVDTEAESITFTIVQP 2356

  Fly   130 AIHG--------------MKFDLKVGEGNRID-----------------EEPTDPYF-------- 155
            ..||              ..|.::....||:.                 .:.|:|:|        
  Rat  2357 PRHGTIERTARGQRYQLTSSFTMEDIYQNRVSYSHDGSNSLKDRFTFTVSDGTNPFFIIEEGGEE 2421

  Fly   156 -----PMQWYLKNTGQNGGKVRLDLNVQAAWAQGITGKNVTTAIMDDGVDYMHPDLKFNYNAEAS 215
                 |.|:.:.....:.|..|:..|:...|.:.:.|| .|..|....:..:.||.:   :::.:
  Rat  2422 IMTAAPQQFLVDILPVDDGTPRIVTNLGLQWLEYMDGK-ATNLITKKELLTVDPDTE---DSQLT 2482

  Fly   216 YDFSSNDPFPYPRYTDDWFNSHGTRCAGEVAAARDNGICGVG----VAYDSKIAGIRMLDQ-PYM 275
            |:.::.   |...|.::...      .|.|||........:|    |.|:.||.  :|:|. .::
  Rat  2483 YEVTTG---PMHGYVENKLQ------PGRVAATFTQEHVNLGLIRYVLYEEKIQ--KMMDSFQFL 2536

  Fly   276 TDLIEANSMGHEPHKIH---------IYSASWGPTDDGKTVDGPRNATMRAIVQGVNEGRNGLGN 331
            ....:.|.:......||         .|:.|.........|....|....|||....|  .|..:
  Rat  2537 VKDSKPNVVSDNIFYIHWSLISFKYTSYNVSEKAGSVSVMVQRTGNLNQYAIVLCRTE--QGTAS 2599

  Fly   332 IYVWASGDGGEEDDCNCDGYAASMW------TISINSAINDGQNAHYDESCSSTLA-STFSNGAK 389
            .....|...|::|...   ||..:.      |.|....|||.......||.:..|: ..::...:
  Rat  2600 SSSRVSSHPGQQDYVE---YAGQVQFDEREDTKSCTIVINDDDVFENIESFTVELSMPAYALLGE 2661

  Fly   390 DPNTGVATTDLYGKCTTTHSGTSAAAPEAAG-VFA-LALEANPQLTWRDIQHLTVLTSKRNSLFD 452
            .....|...|...:.|......:....|:|| :|| :..:.:|......|.:....::..:||:.
  Rat  2662 FTQAKVIINDTEDEPTLEFDKKTYRVNESAGFLFAPIKRQGDPSSAVSAICYTVPKSAMGSSLYA 2726

  Fly   453 AKNRFHWTMNGVGLEFNHLFGFGV 476
            .::...:...|..:|...|.|.||
  Rat  2727 LESGSDFKSRGRSVESRVLLGPGV 2750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amonNP_477318.1 S8_pro-domain 43..122 CDD:293079 21/89 (24%)
Peptidases_S8_Protein_convertases_Kexins_Fur in-like 150..446 CDD:173789 64/331 (19%)
Peptidase_S8 187..459 CDD:278510 57/294 (19%)
Peptidases_S8_S53 <409..485 CDD:299169 15/70 (21%)
P_proprotein 534..621 CDD:279782
Fras1XP_038947596.1 VWC 27..86 CDD:214564
VWC 94..151 CDD:278520
VWC 158..>198 CDD:327433
VWC 224..277 CDD:278520
VWC 284..341 CDD:214564
VWC 368..415 CDD:327433
VSP 405..780 CDD:146106
VSP 728..1059 CDD:146106
FU 1045..1086 CDD:214589
Cadherin_3 1101..1197 CDD:406568
Cadherin_3 1202..1309 CDD:406568
Cadherin_3 1313..1440 CDD:406568
Cadherin_3 1448..1576 CDD:406568
Cadherin_3 1579..1693 CDD:406568
Cadherin_3 1703..1813 CDD:406568
Cadherin_3 1822..1940 CDD:406568
Cadherin_3 1943..2061 CDD:406568
Cadherin_3 2081..2181 CDD:406568
Cadherin_3 2188..2295 CDD:406568 10/50 (20%)
Cadherin_3 2297..2408 CDD:406568 19/127 (15%)
Cadherin_3 2427..2539 CDD:406568 26/126 (21%)
Calx-beta 2555..2652 CDD:413355 21/101 (21%)
Calx-beta 2677..2763 CDD:413355 16/74 (22%)
caca <2782..>3049 CDD:273296
Calx-beta 3041..3135 CDD:413355
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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