DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amon and pcsk9

DIOPT Version :9

Sequence 1:NP_477318.1 Gene:amon / 43215 FlyBaseID:FBgn0023179 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_003200725.1 Gene:pcsk9 / 100150316 ZFINID:ZDB-GENE-060927-1 Length:667 Species:Danio rerio


Alignment Length:570 Identity:123/570 - (21%)
Similarity:179/570 - (31%) Gaps:192/570 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TLPHARSRRSLTHTRALKS---HPAVHTAVQQPG--------------FKRVKRG-----LRPAV 128
            |.|.|.:|.|....|..|.   .|..:..|.:.|              .|..|||     |:...
Zfish    43 TQPEAENRPSAQFYRCTKDAWRMPGQYLVVMRNGTHVNQVERTTRRLSAKAAKRGYLIEILQTYS 107

  Fly   129 PAIHG----MKFD-----LKVGEGNRIDEEPTDPYFPMQWYLKNTGQN------------GGKV- 171
            .|..|    |..|     :|:.....|:|:.:.....:.|.|:...||            |.|| 
Zfish   108 GAFRGFLVKMSSDVLHMAVKLPHVEYIEEDSSIFAQSIPWNLQRVLQNKHEAGKYSPPNDGAKVG 172

  Fly   172 --RLDLNVQAAWAQGITGKNVTTAIM---------DDGVDYMHPDLKFNYNAEASYDFSSNDPFP 225
              .||.:||      :|.:.|...:|         :|||         ..:.:||.         
Zfish   173 VYLLDTSVQ------LTHREVEDRVMVTDFNRVPEEDGV---------RVHRQASQ--------- 213

  Fly   226 YPRYTDDWFNSHGTRCAGEVAAARDNGICGVGVAYDSKIAGIRMLD-QPYMTDLIEANSMGHEPH 289
                    .:||||..|| |.:.||:     |||..:.:..:|:|: |...|  :.....|.|..
Zfish   214 --------CDSHGTHIAG-VISGRDS-----GVARGASVNSVRVLNCQGKGT--VSGALAGLEYI 262

  Fly   290 KIHIYSASWGPT--------DDGKTVDGPRNATMRAIVQGVNEGRNGLGNIYVWASGDGGEEDDC 346
            :..:.|....|.        ...:|:    |...|.||:.        |.:.:.|:|:  ..||.
Zfish   263 QSSLASQPVSPVILLLPFVGGFSRTL----NTACRKIVES--------GAVLIAAAGN--YNDDA 313

  Fly   347 NCDGYAASMWTISINSA------INDGQNAHYDESCSSTLASTFSNGAKDPNTGV--ATTDLYGK 403
            .....|:....|::.:.      :|.|........|....|         |...:  |::|. ..
Zfish   314 CLYSPASEPEVITVGAVNFADQPLNRGTTGTNVGRCVDVFA---------PGDDIISASSDC-PT 368

  Fly   404 CTTTHSGTSAAAPEAAGVFALALEANPQLTWRDI-QHLTVLTSKRNSLFDAKNRFH---WTMNGV 464
            |.||.||||.||...|||.|:.|...|..:..:: |.|               |:|   ..:|..
Zfish   369 CFTTKSGTSQAAAHVAGVAAVLLNLRPNSSSAEVLQQL---------------RYHSVKQVINPE 418

  Fly   465 GLEFNHLFGFGVLDAGAMVTLSKQWHSVPPRYHCEAGELTQPQAIVMGRSLFWEIKTDACKGTDT 529
            .|...|.     |....||.                 .|..|.:.:.|..|.       |:...:
Zfish   419 SLPVMHR-----LTTPNMVV-----------------ALPDPTSTLTGEDLL-------CRSVWS 454

  Fly   530 EVNYLEHVQAVISANASR-RGDLELFLTSPMGTKSMILSRRANDDDHRDG 578
            |    .....|.|...|| |...|:...|......|....|.   :.|||
Zfish   455 E----RSASPVFSTAVSRCRSTEEMLSCSSFSDNGMRAGERV---EERDG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amonNP_477318.1 S8_pro-domain 43..122 CDD:293079 11/52 (21%)
Peptidases_S8_Protein_convertases_Kexins_Fur in-like 150..446 CDD:173789 75/337 (22%)
Peptidase_S8 187..459 CDD:278510 65/301 (22%)
Peptidases_S8_S53 <409..485 CDD:299169 22/79 (28%)
P_proprotein 534..621 CDD:279782 12/46 (26%)
pcsk9XP_003200725.1 Inhibitor_I9 68..138 CDD:283552 14/69 (20%)
Peptidases_S8_PCSK9_ProteinaseK_like 147..412 CDD:173790 77/343 (22%)
Peptidase_S8 167..406 CDD:278510 70/302 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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