DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VII and beat-Vb

DIOPT Version :10

Sequence 1:NP_733162.2 Gene:beat-VII / 43213 FlyBaseID:FBgn0250908 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_731748.1 Gene:beat-Vb / 41583 FlyBaseID:FBgn0038092 Length:328 Species:Drosophila melanogaster


Alignment Length:281 Identity:70/281 - (24%)
Similarity:113/281 - (40%) Gaps:55/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WIIAL----LLGLQQTKPINGQSDVLVNLVVPRYVERGSSATFKCTHNVRPEILFKVTWLKVDKG 65
            |::.|    ||.:::.:.:.     :.::.||:.|:...:.|..|::::....|..|.|.|..| 
  Fly     6 WLLQLGVHMLLVVRRIQCLR-----VTDINVPQIVDFRDNVTLSCSYDISGHTLNSVKWYKNGK- 64

  Fly    66 KFFEFINGRNPPFRNSTIEGAEI--DWDNSNEQ--QVTLKDVQFDLSGQFYCEVSTDTPIFTKAS 126
            :||.:.....|.:....:||.::  |.:..||.  :|.|..:....||.:.||||.|.|.|...:
  Fly    65 EFFRYSPLTPPTYIPFAVEGVQLIDDGNECNESSCRVELNLLGVKSSGVYRCEVSGDAPHFQLTA 129

  Fly   127 ADELMSV-FLPQTGPPTIKFRKRTPFAVGEKLFALCNTTRGRPAPHITWLINGKKV--------- 181
            .|..|:| .|||..|....|  .:.:...:.:...|:|........|||.:||.||         
  Fly   130 RDANMTVEALPQNNPLISSF--HSTYRFNDFVEVNCSTDFSSLFTRITWYVNGIKVSLVDLLPSF 192

  Fly   182 EDRYVRTHHVFSFNGKHQHQRRTQQQ-----QQTQLSQQQLQQQYFQQQYFNQYHQQYHIPVGQF 241
            |...|.  |.:|       .||...|     .:.:..|.|||:...|::..:        |.   
  Fly   193 ETTIVA--HGYS-------MRRIVSQLNFYANEPRFHQLQLQKLIQQKRTIS--------PA--- 237

  Fly   242 MDRYDKSLRWPAGARADEFPH 262
              |....||  ..|..|.:||
  Fly   238 --RLGLELR--CVAEIDRYPH 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VIINP_733162.2 IG_like 34..118 CDD:214653 24/87 (28%)
Ig 141..>183 CDD:472250 10/50 (20%)
beat-VbNP_731748.1 Ig 24..129 CDD:472250 29/110 (26%)
Ig strand B 41..45 CDD:409353 1/3 (33%)
Ig strand C 56..60 CDD:409353 1/3 (33%)
Ig strand E 91..103 CDD:409353 3/11 (27%)
Ig strand F 113..118 CDD:409353 1/4 (25%)
Ig strand G 126..129 CDD:409353 0/2 (0%)

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