DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beat-VII and beat-Vc

DIOPT Version :9

Sequence 1:NP_733162.2 Gene:beat-VII / 43213 FlyBaseID:FBgn0250908 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001356887.1 Gene:beat-Vc / 41575 FlyBaseID:FBgn0038084 Length:297 Species:Drosophila melanogaster


Alignment Length:243 Identity:66/243 - (27%)
Similarity:92/243 - (37%) Gaps:52/243 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLGLQQTKPINGQSDV------LVNLVVPRYVERGSSATFKCTHNVRPEILFKVTWLKVDKGKFF 68
            |||.......||.:.|      |.||.|||.::....|...|::.:....|..|.|.| |..:||
  Fly     6 LLGALLLATFNGMAPVPAEGLHLSNLSVPRIIDVAQKAKLFCSYAMGNRTLNSVKWYK-DGLEFF 69

  Fly    69 EFINGRNPPFRN-STIEGAEIDWDNSNEQQ----VTLKDVQFDLSGQFYCEVSTDTPIFTKASAD 128
            .: :...||..| ..::|..|...:.:..|    |.|:.:....|||:.||||.|.|.|.     
  Fly    70 RY-SPLTPPTTNWFPVKGVTIADGSPHCNQFICNVELEKLTAHSSGQYRCEVSGDAPEFK----- 128

  Fly   129 ELMSVFLPQTGPPTI----KFRKRTPFAVG--------EKLFALCNTTRGRPAPHITWLINGKKV 181
                 .:.||...|:    ||   .||..|        :.|.|.|:|....|...:||.||.|..
  Fly   129 -----LIDQTANMTVGVLPKF---DPFISGVRHAYKYHDYLEANCSTEMSSPMAKLTWYINNKTA 185

  Fly   182 E-----------DRYVRTHHVFSFNGKHQHQRRTQQQQQTQLSQQQLQ 218
            .           .|.|...|:|:   .|.|.|.....|:.....:.|:
  Fly   186 PGHSLQPQINEVSRNVDGFHLFA---SHLHLRLHLDDQRFISKSEMLE 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VIINP_733162.2 Ig 31..118 CDD:299845 27/91 (30%)
IG_like 34..118 CDD:214653 24/88 (27%)
Ig 141..>183 CDD:299845 16/64 (25%)
beat-VcNP_001356887.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.