DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VII and beat-Vc

DIOPT Version :10

Sequence 1:NP_733162.2 Gene:beat-VII / 43213 FlyBaseID:FBgn0250908 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001356887.1 Gene:beat-Vc / 41575 FlyBaseID:FBgn0038084 Length:297 Species:Drosophila melanogaster


Alignment Length:243 Identity:66/243 - (27%)
Similarity:92/243 - (37%) Gaps:52/243 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLGLQQTKPINGQSDV------LVNLVVPRYVERGSSATFKCTHNVRPEILFKVTWLKVDKGKFF 68
            |||.......||.:.|      |.||.|||.::....|...|::.:....|..|.|.| |..:||
  Fly     6 LLGALLLATFNGMAPVPAEGLHLSNLSVPRIIDVAQKAKLFCSYAMGNRTLNSVKWYK-DGLEFF 69

  Fly    69 EFINGRNPPFRN-STIEGAEIDWDNSNEQQ----VTLKDVQFDLSGQFYCEVSTDTPIFTKASAD 128
            .: :...||..| ..::|..|...:.:..|    |.|:.:....|||:.||||.|.|.|.     
  Fly    70 RY-SPLTPPTTNWFPVKGVTIADGSPHCNQFICNVELEKLTAHSSGQYRCEVSGDAPEFK----- 128

  Fly   129 ELMSVFLPQTGPPTI----KFRKRTPFAVG--------EKLFALCNTTRGRPAPHITWLINGKKV 181
                 .:.||...|:    ||   .||..|        :.|.|.|:|....|...:||.||.|..
  Fly   129 -----LIDQTANMTVGVLPKF---DPFISGVRHAYKYHDYLEANCSTEMSSPMAKLTWYINNKTA 185

  Fly   182 E-----------DRYVRTHHVFSFNGKHQHQRRTQQQQQTQLSQQQLQ 218
            .           .|.|...|:|:   .|.|.|.....|:.....:.|:
  Fly   186 PGHSLQPQINEVSRNVDGFHLFA---SHLHLRLHLDDQRFISKSEMLE 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VIINP_733162.2 IG_like 34..118 CDD:214653 24/88 (27%)
Ig 141..>183 CDD:472250 16/64 (25%)
beat-VcNP_001356887.1 None

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