DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VII and Cd80

DIOPT Version :9

Sequence 1:NP_733162.2 Gene:beat-VII / 43213 FlyBaseID:FBgn0250908 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_038943963.1 Gene:Cd80 / 25408 RGDID:2314 Length:324 Species:Rattus norvegicus


Alignment Length:223 Identity:45/223 - (20%)
Similarity:78/223 - (34%) Gaps:60/223 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IALLLGL-QQTKPINGQSDVLVNLVVPRYVERGSSATFKCTHNV--RPEILFKVTWLKVDKGKFF 68
            :.||:|| |.:..|.||....|.          ..|...|.:..  ..:.:.::.|.|.|| ...
  Rat    26 VLLLVGLFQISSGIVGQVSKSVR----------EKALLSCDYKFCSEEQSIHRIYWQKHDK-MVL 79

  Fly    69 EFINGRN---PPFRNSTIEGAEIDWDNSNEQQVTLKDVQFDLSGQFYCEVS------------TD 118
            ..|:|..   |.::|.|:      :|.:|....:|..:.....|.:.|.|.            |.
  Rat    80 SVISGVPEVWPEYKNRTV------YDIANNYSFSLLGLILSDRGTYTCVVQRYEGGSYVVKHLTT 138

  Fly   119 TPIFTKASADELMSVFLPQTGPPTIKFRKRTPFAVGEKLFALCNTTRGRPAPHITWLINGKKV-- 181
            ..:..:|   :..:..:.::|.|:...::.|.||.|           |.|.|.::||.||:::  
  Rat   139 VELSVRA---DFPTPNITESGNPSADIKRITCFASG-----------GFPKPRLSWLENGRELNG 189

  Fly   182 ---------EDRYVRTHHVFSFNGKHQH 200
                     |...........||..:.|
  Rat   190 INTTISQDPESELYTISSQLDFNTTYDH 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VIINP_733162.2 Ig 31..118 CDD:299845 17/103 (17%)
IG_like 34..118 CDD:214653 17/100 (17%)
Ig 141..>183 CDD:299845 12/52 (23%)
Cd80XP_038943963.1 Ig 40..144 CDD:416386 21/120 (18%)
FR1 40..55 CDD:409353 4/24 (17%)
Ig strand A 41..46 CDD:409353 2/4 (50%)
Ig strand B 50..56 CDD:409353 1/5 (20%)
CDR1 56..65 CDD:409353 0/8 (0%)
Ig strand C 66..73 CDD:409353 1/6 (17%)
FR2 66..72 CDD:409353 0/5 (0%)
CDR2 73..92 CDD:409353 6/19 (32%)
Ig strand C' 77..82 CDD:409353 0/4 (0%)
Ig strand C' 85..88 CDD:409353 0/2 (0%)
FR3 93..126 CDD:409353 8/38 (21%)
Ig strand D 95..101 CDD:409353 2/11 (18%)
Ig strand E 104..109 CDD:409353 0/4 (0%)
Ig strand F 117..127 CDD:409353 3/9 (33%)
CDR3 127..130 CDD:409353 0/2 (0%)
Ig strand G 130..144 CDD:409353 1/13 (8%)
FR4 131..144 CDD:409353 1/12 (8%)
IgC1_CD80 147..237 CDD:409505 17/82 (21%)
Ig strand B 163..167 CDD:409505 0/3 (0%)
Ig strand C 177..181 CDD:409505 0/3 (0%)
Ig strand E 207..211 CDD:409505 0/3 (0%)
Ig strand F 218..223 CDD:409505 45/223 (20%)
Ig strand G 231..234 CDD:409505
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2D8C9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1083437at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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