DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlD and TwdlC

DIOPT Version :10

Sequence 1:NP_651492.1 Gene:TwdlD / 43210 FlyBaseID:FBgn0039444 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_651519.1 Gene:TwdlC / 43245 FlyBaseID:FBgn0039469 Length:360 Species:Drosophila melanogaster


Alignment Length:281 Identity:62/281 - (22%)
Similarity:110/281 - (39%) Gaps:78/281 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YQPVAHADEGLSFLPGSGQVIGELPSQV-LPVQ---------SGEAVLSQPIEA-----PVAPQI 72
            |||:.......:|.|         |.|. ||.|         :..|..::|:.|     .:|.::
  Fly    54 YQPLPQEQSFANFAP---------PQQTYLPPQMHLDAIEQVAPTAAAAEPLNAYDDSYNMAHRL 109

  Fly    73 A-----------PLVEEFQKEFYSYAAPEEQYDEGASNQQIANS---LKKNLRVVFIRTPENQGF 123
            :           |...:..|..|.:..|::..:|.|...::.:.   .:|:.::|||:.|.....
  Fly   110 SGVQHASGYNNGPQETKVHKHIYVHVPPKDFEEEDAIQTRVHHQQGPKQKHYKIVFIKAPSAPAI 174

  Fly   124 ERAALQLAKQSAQQETAIYVLTKQSDVSNLAKQLNALKT---SSTNKPEVHFVKYRTPEDAA--- 182
            .:..:....|: :::|.||||.|:.:    .:|...:.|   :..:||||:|:||:|.:|.|   
  Fly   175 RQPVVPPPPQN-EEKTLIYVLHKKPE----QEQDIVIPTPPPTKPSKPEVYFIKYKTKKDEAPVY 234

  Fly   183 -------NAQLAIQNQYNQLPGVSRISNEGRAPVLNFASSPAQAAAIPAVAAAAPSSEYLPANVV 240
                   ..:.|....:..|..|:.:     .|....|.:|......||:    ||:.|.|....
  Fly   235 GPPPAEMEPRQATAEDFAPLAEVADV-----LPPTTLAPAPEPEVEQPAI----PSAVYGPPTAA 290

  Fly   241 A--GQD-----------YLPP 248
            |  |::           ||||
  Fly   291 AYTGEEVQTTLSAPANQYLPP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlDNP_651492.1 DM5 78..178 CDD:214776 26/105 (25%)
TwdlCNP_651519.1 DUF243 125..227 CDD:472232 26/106 (25%)

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