DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlD and TwdlN

DIOPT Version :10

Sequence 1:NP_651492.1 Gene:TwdlD / 43210 FlyBaseID:FBgn0039444 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_733160.1 Gene:TwdlN / 43207 FlyBaseID:FBgn0039441 Length:309 Species:Drosophila melanogaster


Alignment Length:331 Identity:140/331 - (42%)
Similarity:178/331 - (53%) Gaps:98/331 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAFIVLCLLAVSCSADKLGYNYQPVAHADEGLSFLPGSGQV----------------------- 42
            ||||:||||:|:: |||||||||:||.|:..||||.||||.:                       
  Fly     1 MRAFVVLCLVAIA-SADKLGYNYKPVGHSSSGLSFAPGSGSLSLGGGGGSLGLGGSSGSLDLGGA 64

  Fly    43 -----------------------------------------------IGE-LPSQVLPVQSGEAV 59
                                                           :|. |.|..|....|.|.
  Fly    65 SGSLGLGGGSNFGSLDGGFGGLGGGSIDLGSSGLGSSGLGSGLGSSGLGSGLGSSGLGSGLGSAG 129

  Fly    60 LSQPIE----APVAPQIAPLVEEFQKEFYSYAAPEEQYDEGASNQQIANSLKKNLRVVFIRTPEN 120
            ||.|:.    ||.|        |.||||::|.|.||.:||..:.:::|:|:.|.||||||:.|||
  Fly   130 LSAPVSYNAPAPAA--------ELQKEFFTYTANEEDFDEPQALERVASSVNKGLRVVFIKGPEN 186

  Fly   121 QGFERAALQLAKQSAQQETAIYVLTKQSDVSNLAKQLNALKTSSTNKPEVHFVKYRTPEDAANAQ 185
            :|.|.|||.||||:||||||||||.||:|:.:||::|||::::|.||||||||||||||||||||
  Fly   187 RGLENAALALAKQAAQQETAIYVLNKQADIGDLAQKLNAIRSNSNNKPEVHFVKYRTPEDAANAQ 251

  Fly   186 LAIQNQYNQLPGVSRISNEGRAPVLNFASSPAQAAAIPAVAAAAPSSEYLPANVVAGQDYLPPNL 250
            .|||:||:||.|.|:..|.|.|..|||||    |..:....|..|.:.|||::|          |
  Fly   252 RAIQSQYDQLGGSSQAINGGVANALNFAS----AGPVRQATAQIPENSYLPSSV----------L 302

  Fly   251 RRFRVK 256
            ||.|.:
  Fly   303 RRLRYR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlDNP_651492.1 DM5 78..178 CDD:214776 62/99 (63%)
TwdlNNP_733160.1 DM5 143..244 CDD:214776 63/108 (58%)

Return to query results.
Submit another query.