DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlD and TwdlJ

DIOPT Version :10

Sequence 1:NP_651492.1 Gene:TwdlD / 43210 FlyBaseID:FBgn0039444 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_651489.2 Gene:TwdlJ / 43206 FlyBaseID:FBgn0039440 Length:274 Species:Drosophila melanogaster


Alignment Length:275 Identity:141/275 - (51%)
Similarity:180/275 - (65%) Gaps:23/275 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAF-IVLCL-LAVSCSADKLGYNYQPVAHADEGLSFLPGSGQVIGELPS-QVLPVQS---GEAV 59
            ||.| :|||| |||...|||||||||||||:..||||.| ||....:.|: ...|.:|   |.:.
  Fly     1 MRQFSVVLCLCLAVLARADKLGYNYQPVAHSPSGLSFQP-SGSASSDAPAFAPAPSESFGPGPSS 64

  Fly    60 LSQPIE---APVAPQIAPLVEEFQKEFYSYAAPEEQYDEGASNQQIANSLKKNLRVVFIRTPENQ 121
            ::..:|   :..||..|....:.:|||::|.|.|..:.:.|::.::||::.|.||||||:.|||:
  Fly    65 IADALEGSQSAAAPNYAAPQAQLEKEFFTYTADEGDFYDPAASDRVANAVNKGLRVVFIKGPENR 129

  Fly   122 GFERAALQLAKQSAQQETAIYVLTKQSDVSNLAKQLNALKTSSTNKPEVHFVKYRTPEDAANAQL 186
            |.|.|||.||||:||||||||||.||:|:.:||.:||:::.::.||||||||||||||||||||.
  Fly   130 GLEDAALALAKQAAQQETAIYVLNKQADIGDLANKLNSIRNNNNNKPEVHFVKYRTPEDAANAQS 194

  Fly   187 AIQNQYNQLPGVSRISNEGRAPVLNFASSPA--QAAAIPAVA---------AAAPSSEYLPANVV 240
            |||.||:||.|.|:..:.|.|..|||||.||  |||:..|.|         |.||.|.|:|. ..
  Fly   195 AIQGQYDQLGGSSQAQDGGVASTLNFASQPAPVQAASSQAPAQFLPASQPEATAPISSYVPP-AT 258

  Fly   241 AGQDYLPPN-LRRFR 254
            .|..|||.| |||.|
  Fly   259 PGSSYLPANILRRLR 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlDNP_651492.1 DM5 78..178 CDD:214776 56/99 (57%)
TwdlJNP_651489.2 DM5 85..186 CDD:214776 56/100 (56%)

Return to query results.
Submit another query.