DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlS and TwdlH

DIOPT Version :10

Sequence 1:NP_651491.1 Gene:TwdlS / 43209 FlyBaseID:FBgn0039443 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_651490.1 Gene:TwdlH / 43208 FlyBaseID:FBgn0051080 Length:241 Species:Drosophila melanogaster


Alignment Length:193 Identity:63/193 - (32%)
Similarity:89/193 - (46%) Gaps:23/193 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EVYLPAE-----------NEVSSGGKLATEYFTYAAPPEDDQVAPWQSARELAKVLSPPQQVVFI 85
            |.|.||.           |..:...:|..|:|||.| .|.|.|.| ..:::::..|:...:|:||
  Fly    53 ETYAPASAPEAAPSAVATNYAAPQAELQKEFFTYTA-DEQDFVEP-AGSQQVSASLNKALRVIFI 115

  Fly    86 RTPET----NIFTLTAKQLAVNNPLDIFVLHRQADADALAKQQAAIQQQVSEKPSVHFVKYRTPA 146
            :.||.    |.....||| |......|:||::|||...|:.:..:|:...:.||.||||||||..
  Fly   116 KGPENTGLENAAVALAKQ-AGQQETAIYVLNKQADIGDLSNKLNSIRNNNNNKPEVHFVKYRTNQ 179

  Fly   147 DVTRALSALRSDYDRLPGNSISHAIEKADVVQLKPQTTETPVIFKIRPKDSDYYETHEPASEL 209
            |...|..|::|.||:|.|:|.......|.|:....|.....|.....|..|     :.|||.|
  Fly   180 DALNAQQAIQSQYDQLGGSSTILNGGVAPVLNFASQPAAQQVAAPSAPGSS-----YLPASVL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlSNP_651491.1 DM5 45..145 CDD:214776 38/103 (37%)
TwdlHNP_651490.1 DM5 77..178 CDD:214776 38/103 (37%)

Return to query results.
Submit another query.