DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlS and TwdlJ

DIOPT Version :10

Sequence 1:NP_651491.1 Gene:TwdlS / 43209 FlyBaseID:FBgn0039443 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_651489.2 Gene:TwdlJ / 43206 FlyBaseID:FBgn0039440 Length:274 Species:Drosophila melanogaster


Alignment Length:203 Identity:67/203 - (33%)
Similarity:98/203 - (48%) Gaps:38/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 AENEVSSGGKLATEYFTYAAPPEDDQVAPWQSARELAKVLSPPQQVVFIRTPET----NIFTLTA 97
            |.|..:...:|..|:|||.| .|.|...|..|.| :|..::...:||||:.||.    :.....|
  Fly    77 APNYAAPQAQLEKEFFTYTA-DEGDFYDPAASDR-VANAVNKGLRVVFIKGPENRGLEDAALALA 139

  Fly    98 KQLAVNNPLDIFVLHRQADADALAKQQAAIQQQVSEKPSVHFVKYRTPADVTRALSALRSDYDRL 162
            || |......|:||::|||...||.:..:|:...:.||.|||||||||.|...|.||::..||:|
  Fly   140 KQ-AAQQETAIYVLNKQADIGDLANKLNSIRNNNNNKPEVHFVKYRTPEDAANAQSAIQGQYDQL 203

  Fly   163 PGNS----------ISHAIEKADVVQLKPQTTETPVIFKIRPKDSDYYETHEPASELE-TAKLQA 216
            .|:|          ::.|.:.|.|   :..:::.|..|.             |||:.| ||.:.:
  Fly   204 GGSSQAQDGGVASTLNFASQPAPV---QAASSQAPAQFL-------------PASQPEATAPISS 252

  Fly   217 LFREYLPP 224
                |:||
  Fly   253 ----YVPP 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlSNP_651491.1 DM5 45..145 CDD:214776 40/103 (39%)
TwdlJNP_651489.2 DM5 85..186 CDD:214776 40/103 (39%)

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