DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlS and Twdlbeta

DIOPT Version :9

Sequence 1:NP_651491.1 Gene:TwdlS / 43209 FlyBaseID:FBgn0039443 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_610707.2 Gene:Twdlbeta / 36265 FlyBaseID:FBgn0033658 Length:198 Species:Drosophila melanogaster


Alignment Length:148 Identity:35/148 - (23%)
Similarity:58/148 - (39%) Gaps:34/148 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AKNPLPVRNIAAMLSLLLLWTFLGFCHGLGEVYLPAENEVSSGGKLATEYFTYAAPPEDDQVAPW 66
            |..||||....|        .|.|         .||.:|.     |.|:......|||:.:..|.
  Fly    46 AAQPLPVYGPPA--------AFYG---------PPAASEA-----LVTKNVYVHVPPEEPEFYPA 88

  Fly    67 QSARELAKVLSPPQQVVFIRTPE--TNIFTLTAKQLAVNNPLDIFVLHRQADADALAKQQAAI-- 127
            .|..:.| |.....:::||:.|.  |.:..:....:...:...::||.::.:     :||..|  
  Fly    89 SSPIQTA-VPKKHYKIIFIKAPNPPTPVRQVLPPPVQDEHKTLVYVLVKKPE-----EQQPVILP 147

  Fly   128 --QQQVSEKPSVHFVKYR 143
              :.....||.|:|:||:
  Fly   148 APEPTEPSKPEVYFIKYK 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlSNP_651491.1 DM5 45..145 CDD:214776 24/105 (23%)
TwdlbetaNP_610707.2 DM5 68..167 CDD:214776 24/109 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR31927
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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