DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlN and TwdlV

DIOPT Version :10

Sequence 1:NP_733160.1 Gene:TwdlN / 43207 FlyBaseID:FBgn0039441 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_649446.1 Gene:TwdlV / 40537 FlyBaseID:FBgn0037227 Length:251 Species:Drosophila melanogaster


Alignment Length:342 Identity:96/342 - (28%)
Similarity:131/342 - (38%) Gaps:138/342 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAFVVLCLVAIASADKLGYNYKPVGHSSSGLSFAPGSGSLSLGGGGGSLGLGGSSGSLDLGGAS 65
            |..|:||||.::|.|...||||.|                       |..|.||.|.:       
  Fly     1 MSGFIVLCLCSVALAAPQGYNYNP-----------------------GPSGFGGISTT------- 35

  Fly    66 GSLGLGGGSNFGSLDGGFGGLGGGSIDLGSSGLGSSGLGSGLGSSGLGSGLGSSGLGSGLGSAGL 130
                .||||.|           .|::.:                                     
  Fly    36 ----TGGGSFF-----------QGAVQV------------------------------------- 48

  Fly   131 SAPVS----YNAPA-------------PAAELQKEFFTYTANE--EDFDEPQALERVASSVNK-G 175
             |||.    |..||             ..|.:.|.||.::|.|  ||:.|    ..:...|.| .
  Fly    49 -APVQPQAVYQQPAAQTHHHQQQQVQQQQAIVSKRFFIHSAPEEAEDYKE----RHITVGVPKRN 108

  Fly   176 LRVVFIKGPENRGLENAALALAKQAAQQETAIYVLNKQADIGDLAQKLNA---IRSNSNNKPEVH 237
            ..|||||.|:..  ....:.::..|.:::|.||||:|:.:     ..|||   .:::|.:||||.
  Fly   109 YNVVFIKSPQRN--NRKTIKISPAANEEKTVIYVLSKKGE-----SDLNAEVVEQASSTSKPEVF 166

  Fly   238 FVKYRTPEDAANAQRAIQSQYDQLGGSSQAINGGVANALNFASA----------GPVRQAT--AQ 290
            |:||:|.|:||:||:.||:|||.||||||..:.|||...:...|          |.|..||  .|
  Fly   167 FIKYKTNEEAAHAQQQIQAQYDALGGSSQLTDEGVAPVTSVIGALGGSDGHIDGGSVVGATGAGQ 231

  Fly   291 IPE---------NSYLP 298
            |..         |:|||
  Fly   232 IVSTGTAGSHTGNAYLP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlNNP_733160.1 DM5 143..244 CDD:214776 35/106 (33%)
TwdlVNP_649446.1 DM5 78..173 CDD:214776 34/105 (32%)

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