DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlB and TwdlQ

DIOPT Version :10

Sequence 1:NP_651486.1 Gene:TwdlB / 43202 FlyBaseID:FBgn0039436 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_651496.1 Gene:TwdlQ / 43214 FlyBaseID:FBgn0039448 Length:245 Species:Drosophila melanogaster


Alignment Length:296 Identity:115/296 - (38%)
Similarity:147/296 - (49%) Gaps:67/296 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAFIVLCLVAVTCADKLGYNYQPVGHSSSGLSFAPGSGSISGGSIGGGSIGGGSIGGGSIGGGL 65
            ||.|::|.|:|...|.|||||||                               :..|.....||
  Fly     1 MRGFLLLLLIASVSAAKLGYNYQ-------------------------------AAAGDRRFAGL 34

  Fly    66 IGGGSIGGGSIGGGSLGGSIGGGSIDSGLGGLGGLGGLGGGDALAAPVSYNA----PAPAAELQK 126
            |...:.|..|.........                      .|....|..|.    ||.|.|..|
  Fly    35 IDAEATGFSSTSTQQQQQQ----------------------QAQQELVQQNTQQQIPAAADEFSK 77

  Fly   127 EFFTYSANEQDFDEPQELERVAGSVNKGLRVVFIKGPENRGLENAALALAKQAAQQETAIYVLNK 191
            ||:||:|.|::|.:.:..|.:|..:.:.|||:|||.||::||.||||.|||||::|.||||||:|
  Fly    78 EFYTYAAPEEEFADQEATEHIASMLKRNLRVLFIKSPEHQGLTNAALQLAKQASEQRTAIYVLSK 142

  Fly   192 QADIGDLAQKLNAIRNNNNNKPEVHFVKYRTPEDAANAQRAIQGQYDQLGGSSQAHDGGVAPALN 256
            |||:..|||:|.......:.|||||||||||||||..||:.||.|:|.|||||::.|.||||.|:
  Fly   143 QADVSQLAQRLANENQAQSPKPEVHFVKYRTPEDAVRAQQLIQQQFDSLGGSSRSSDEGVAPVLD 207

  Fly   257 FASAG---PVQKAN-------AQIPDNAYLPTSVFR 282
            |:||.   .||:.|       |..|...|||.::.|
  Fly   208 FSSAPAAISVQEQNEAQNQVQAVTPLTKYLPAALLR 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlBNP_651486.1 DM5 122..223 CDD:214776 55/100 (55%)
TwdlQNP_651496.1 DM5 73..174 CDD:214776 55/100 (55%)

Return to query results.
Submit another query.