DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlB and TwdlV

DIOPT Version :10

Sequence 1:NP_651486.1 Gene:TwdlB / 43202 FlyBaseID:FBgn0039436 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_649446.1 Gene:TwdlV / 40537 FlyBaseID:FBgn0037227 Length:251 Species:Drosophila melanogaster


Alignment Length:318 Identity:93/318 - (29%)
Similarity:123/318 - (38%) Gaps:111/318 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAFIVLCLVAVTCADKLGYNYQPVGHSSSGLSFAPGSGSISGGSIGGGSIGGGSIGGGSIGGGL 65
            |..||||||.:|..|...||||.|                                         
  Fly     1 MSGFIVLCLCSVALAAPQGYNYNP----------------------------------------- 24

  Fly    66 IGGGSIGGGSIGGGSLGGSIGGGSIDSGLGGLGGLGGLGGGDALAAPVS----YNAPA------- 119
                    |..|.|.:..:.||||...|.             ...|||.    |..||       
  Fly    25 --------GPSGFGGISTTTGGGSFFQGA-------------VQVAPVQPQAVYQQPAAQTHHHQ 68

  Fly   120 ------PAAELQKEFFTYSANEQDFDEPQELERVAGSVNKGLRVVFIKGPENRGLENAALALAKQ 178
                  ..|.:.|.||.:||.| :.::.:|.....|...:...|||||.|:..  ....:.::..
  Fly    69 QQQVQQQQAIVSKRFFIHSAPE-EAEDYKERHITVGVPKRNYNVVFIKSPQRN--NRKTIKISPA 130

  Fly   179 AAQQETAIYVLNKQADIGDLAQKLNA---IRNNNNNKPEVHFVKYRTPEDAANAQRAIQGQYDQL 240
            |.:::|.||||:|:.:     ..|||   .:.::.:||||.|:||:|.|:||:||:.||.|||.|
  Fly   131 ANEEKTVIYVLSKKGE-----SDLNAEVVEQASSTSKPEVFFIKYKTNEEAAHAQQQIQAQYDAL 190

  Fly   241 GGSSQAHDGGVAPALNFASA----------GPVQKAN--AQI---------PDNAYLP 277
            |||||..|.||||..:...|          |.|..|.  .||         ..|||||
  Fly   191 GGSSQLTDEGVAPVTSVIGALGGSDGHIDGGSVVGATGAGQIVSTGTAGSHTGNAYLP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlBNP_651486.1 DM5 122..223 CDD:214776 32/103 (31%)
TwdlVNP_649446.1 DM5 78..173 CDD:214776 31/102 (30%)

Return to query results.
Submit another query.