DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlP and TwdlF

DIOPT Version :10

Sequence 1:NP_651485.1 Gene:TwdlP / 43201 FlyBaseID:FBgn0039435 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_649443.1 Gene:TwdlF / 40534 FlyBaseID:FBgn0037224 Length:354 Species:Drosophila melanogaster


Alignment Length:313 Identity:81/313 - (25%)
Similarity:126/313 - (40%) Gaps:110/313 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRALIILSIVAAASAGSLSGYN------------------------YGQGATTSIGGSG------ 35
            |:..::|..:.|.:|.:..||.                        |..||..|...:|      
  Fly     1 MKQFVVLMCLVALTATAPQGYKYQPQLPALPIGNLRPLTPISSSGIYASGAVPSFPQAGAQPAIG 65

  Fly    36 ------------VSPVPALA-GPVSYS--------AAPQ-------------------------- 53
                        .:|.||.| .|:|.|        |:||                          
  Fly    66 VQPAIQAVQTIVAAPAPAPAPAPLSISLPKETFLTASPQQNLISTVQQQPQQIVYQQQPQQALQT 130

  Fly    54 ------ASVHKEFYSFYA---NDDDFEDKAALQRALASVKKNIRVIFIKSP-ENRGYENAVLALA 108
                  |.|.|:.|...|   |::..:|:..|:.  ..::||.|::|||:| :|..|..|.|..|
  Fly   131 QFVQRPAIVTKDIYIHSAPEENEELRQDEPLLEN--VPIRKNYRIVFIKAPSQNLKYTAAALKRA 193

  Fly   109 KQAAQQQTAIYVLHKQTDINELAQKFNAVRQNAN-KKPEVHFVKYRTPEDAANAQRAIQSQYDQL 172
            :.:.:::|.||||.|:.|:.|:.|:....:..|. :||||:|:||:|.|:|..||:.||:|||.|
  Fly   194 QSSNEEKTVIYVLSKKPDLTEIQQQLQVTQSEAKVQKPEVYFIKYKTQEEAQRAQQEIQAQYDAL 258

  Fly   173 GGSSQ----------SINGGVANAINFASQ----------GAAPARVTPQQVP 205
            ||::.          |::.|..|..:|..|          ..||..:.||..|
  Fly   259 GGATHISDEGVAPIASVSSGSLNLGSFVPQHSQAGQTIIHSQAPTIIQPQGQP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlPNP_651485.1 DUF243 56..152 CDD:460806 34/100 (34%)
TwdlFNP_649443.1 DM5 137..241 CDD:214776 37/105 (35%)

Return to query results.
Submit another query.