Sequence 1: | NP_001163744.1 | Gene: | plum / 43197 | FlyBaseID: | FBgn0039431 | Length: | 1298 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
Alignment Length: | 1377 | Identity: | 263/1377 - (19%) |
---|---|---|---|
Similarity: | 439/1377 - (31%) | Gaps: | 478/1377 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 107 QVSYRKND----------FFIYDNGTLRL-PTNEKASGEYYCKIE----WDESAVISDRITVEYP 156
Fly 157 VLKRLFPGQQQAANISALENKPLVLSCPFLSVPAARFSWYFGNDSLTNDNSAL----ILTNGTLI 217
Fly 218 LRHLRLEQAGKYKCVAQNTFASKTHRQFIWQLQVEPKDATFYPKNE-AGITETAVSEAQ------ 275
Fly 276 -------------LLPAFQNATVFV---PAGGSVLLQCHAVADFVPIVWYLQPPNNKMVRLSNNS 324
Fly 325 VAYSITNASIARHEGRYSCITPLETQNFQVIVTTPPRIVSR------LPVEVVYIGLSRTLTCRA 383
Fly 384 EGHPEPSITWYHNGVHL--------NSSYTRYISGNELHVHSFDSKEEGIYQCVARNVAGEDSAT 440
Fly 441 GELRFNRQLEEVNPLQNIR--------CYP------------HSFHSINITFDSRTLTSMFVVYI 485
Fly 486 V----RNNPHSWTSFSPMKLNQTSYVVISTDLPVYEPFALITRVLFPTTEVRTGTLVPQQMILSS 546
Fly 547 LRSTPVTCCTQ----GLML---RPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHPAQLLNG 604
Fly 605 S-LQGTLTSVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVDASV 668
Fly 669 TGILLQRFTRIKMRVLIITTENEFLGQDFRYVQWKIIENGTSEQS--NMPFRLVTRESRALAFKF 731
Fly 732 LDSLNETCVLECHTEIQAQMSLPSQDPKCQDRNIANSLLLVTGLKPDTRYNLHFYNCKTRIFYGD 796
Fly 797 IDEK--------TEQDPPGTI---SNSKLIKQNGLKLMWEPP---------INPNGRVHHYDIRW 841
Fly 842 S----LDNVTHEAIVKECTKCSYKFPNVSETAKIHVAVRVMGDTGAG-----APMYFD------- 890
Fly 891 -MINNNHTWLKEESESSHSEVYSGIAIGSLLSIACVFLFGLFIIFQQRNFKARAQGPTHLTTPTD 954
Fly 955 INFGNLSSASGMPGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIELLPEHSLEYQTSTAAVAVVHL 1019
Fly 1020 ANGNG-------SVQVARRSDQDGAAQGD-LGIAGVHNLSQLPLCGVGGTSPERKTVQDAMLQEA 1076
Fly 1077 KAFYIPYRHTPPNAVALSSSKQCAVPSGSELEVIVPPNSLPLVTTMPGLGVVGGGGSGG----GG 1137
Fly 1138 VGGSSRRS------GSLSSSSASSSSNGSSKKQFHTNFVRHSNSNDGIYLLAEEEAAATLTPTSE 1196
Fly 1197 RE-------------YAAVCLTNGFKLP-----------ADVAKSGGGTYNTTNNNNS--STNTS 1235
Fly 1236 QKSATAKERQPRGNGNPISFSHNACKVPANGPASVNVNHSS-----------AVKQSWPA----A 1285
Fly 1286 TVVHRRAQVDPN 1297 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
plum | NP_001163744.1 | IG_like | 170..241 | CDD:214653 | 18/74 (24%) |
IGc2 | 175..235 | CDD:197706 | 15/63 (24%) | ||
IG_like | 284..356 | CDD:214653 | 14/74 (19%) | ||
I-set | 360..443 | CDD:254352 | 28/96 (29%) | ||
IGc2 | 378..435 | CDD:197706 | 20/64 (31%) | ||
FN3 | 804..886 | CDD:238020 | 20/102 (20%) | ||
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | |
I-set | 91..184 | CDD:254352 | |||
I-set | 190..279 | CDD:254352 | 15/58 (26%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 15/58 (26%) | ||
I-set | 283..370 | CDD:254352 | 25/96 (26%) | ||
Ig | 300..370 | CDD:299845 | 18/73 (25%) | ||
Ig | 388..>457 | CDD:299845 | 15/78 (19%) | ||
I-set | 479..561 | CDD:254352 | 25/90 (28%) | ||
Ig | 496..561 | CDD:143165 | 21/73 (29%) | ||
FN3 | 588..681 | CDD:238020 | 19/106 (18%) | ||
FN3 | <817..856 | CDD:238020 | 9/70 (13%) | ||
fn3 | 864..952 | CDD:278470 | 18/92 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45452283 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |