DRSC/TRiP Functional Genomics Resources

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Protein Alignment plum and sns

DIOPT Version :10

Sequence 1:NP_651482.3 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster


Alignment Length:1500 Identity:286/1500 - (19%)
Similarity:497/1500 - (33%) Gaps:440/1500 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IYDNGTLRLPTNEKASGEYYCKI---EWDESAVISDRITVEYPVLKRLFPGQQQAANISALENKP 178
            ||:........|:.|  :|.|::   ..:.:...:.::||..|.......|....:.:...||:.
  Fly   133 IYNLRISNASINDDA--DYQCQVGPARLNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQD 195

  Fly   179 LVLSCPFLSV-PAARFSWYFGN---------DSLTNDNSALILTNGTLILRHLRLEQAGKYKCVA 233
            |.|.|...:. |||:..||.||         |::....:....|..:|.|:....:...:|.|.|
  Fly   196 LQLKCIVANAKPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQA 260

  Fly   234 QNT----------------------------FASKTHR------------------QFIW----- 247
            ::.                            .|.:|.|                  |.||     
  Fly   261 RHKALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWYKNGS 325

  Fly   248 QLQVEPKDATFYPKN------EAGITE--------TAVSEAQLLPAFQNATVFVPAGGSVLLQCH 298
            |:::..:.:....:|      |||..:        ..:|:..|....:.:.:|.|...:|:....
  Fly   326 QIRMAYRTSGRLSENIYTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTE 390

  Fly   299 A-VADFVPIVWYLQPPN----------NKMVRLSNNSVAYS-------ITNASIARHEGRYSCIT 345
            | |.|.||:.....|.|          .:.||.:.:....|       .:|.:......:.|.:.
  Fly   391 ARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVV 455

  Fly   346 PLETQNFQV---IVTT----------PPRIVSRLPVEVVYIGLSRTLTC-RAEGHPEPSITWYHN 396
            .....|.|:   :|:|          ||.|...:..:::..|..:.|.| .:.|:|..::|||.|
  Fly   456 ICHGLNMQLTENVVSTHTINVLYPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKN 520

  Fly   397 GVHLNS---SYTRYISGNELHVHSFDSKEEGIYQCVARNVAGE----DSATGELRFNRQL----- 449
            ...:||   :..:.:|. |:.:.:..|..:..|:|.|.|.|.|    .|.|..:.|..:.     
  Fly   521 DKRINSVIRAADKSVSA-EITILANVSDNQAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRI 584

  Fly   450 --EEVNP--LQNIRCYPHS---------------FHSINIT-----FDSRTLTSMFVVYIVRN-N 489
              ||:.|  ...|.|...|               ...||.|     :.....|..|.|.:.:. |
  Fly   585 EPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMN 649

  Fly   490 PHSWTSFSPMK-LNQTSYVVISTDLPVYEPFALITRVLFPTTEVRTGTLVPQQMILSSLRS---- 549
            ...:|..|..: |.::::..:|.|: :|.|     :.:.|.:....|  |..:.:..||::    
  Fly   650 GQVYTCQSANEALQRSAHEAVSLDV-LYRP-----KFVPPPSSTAVG--VEGESLQVSLQTRANP 706

  Fly   550 TPVTCCTQGLMLRPIAVGNDTFVKWSQG-----QLENKKYFILQFSINHTHPH---------PAQ 600
            ||||                  .||::.     |..:.:.|....|:|.|..|         .|.
  Fly   707 TPVT------------------YKWTKDGTTIPQDGDHRIFADGGSLNFTRLHRDDAGIYSCSAS 753

  Fly   601 LLNGSLQGTLTSVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVD 665
            ...|.....:|.|.|....:: .::|...:|....|.:...||.:. :.::.::.|...:.:.|.
  Fly   754 NSQGGATLNITVVVEYGTTIK-SVSENIVVNPGEDAMLSCTVEGKP-LTEEHVKWERVGYDMTVK 816

  Fly   666 ASVTGILLQRFTRIKMRVLIITTENEFLGQDFRYVQWKIIENGTSEQSNMPFRLVTRESRALA-- 728
            .|.|......:..||      ..:.|.:| :||.|....::|.|    |....|:.:.:..:|  
  Fly   817 TSTTFANGTSYLHIK------DAKREDVG-NFRCVADNRVDNPT----NRDILLIVKFAPEIAKT 870

  Fly   729 ---FKFLDSLNETCVLECHTE---------IQAQMSLP---SQDPKCQDRNIAN----SLLLVTG 774
               .:......|...|.|..:         .|.:..||   :...:.::|.|.:    |.|:|..
  Fly   871 PTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEERKIDSLTYESTLIVDK 935

  Fly   775 LKPDTRYNLHFYNCKTRIFYGD------IDEKTEQDPPGTISNSKLIKQNGLKLMWEPPINPNGR 833
            :.| ..|..  |.|..|...|:      ::..::.|||.:: |...:..:.:.|.|.|..: .|.
  Fly   936 VAP-ADYGA--YECVARNELGEAVETVRLEITSQPDPPLSL-NILNVTHDTVTLAWTPGFD-GGL 995

  Fly   834 VHHYDIRWSLDNVTHEAIVKECTKCSYKF----PNVSETAKIHVA---------VRVMGDTGAGA 885
            ...|.:|:.:           ..:..||:    ||   :.|:.:.         ..||.....|.
  Fly   996 KASYRVRYRM-----------ADREQYKYIDGLPN---SHKLTIGGLRMNTLYLFSVMSWNELGQ 1046

  Fly   886 PMYFDMINNNHTWLKEESESSH------------SEVYSGIAIGSLL----SIACVFLFGLFII- 933
            ..|...:....|  ||....||            |:...|...|.||    :...|.|..:|:| 
  Fly  1047 SSYLPDLARAET--KEAPPPSHPASSLGGGPPTTSQTPLGGTSGMLLVGVGAGIVVVLLNVFVIG 1109

  Fly   934 --FQQRNFKARAQG----PTHLT-----TPTDINFGNLSSASGM--------------------- 966
              ..:||.|...:|    |..||     ||..:..|...:|.|.                     
  Fly  1110 CCLHKRNEKRLKRGLELMPAELTEDSSNTPNLVIIGISLAAFGFLLVNASLVAWFFVHQRRKKVA 1174

  Fly   967 ----------------PGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIE--LLPEHSLEYQTSTAA 1013
                            |......::|.||.....:.::      |..|  ..||:..|.:...|:
  Fly  1175 ETTNQPAKTATIEMYAPSSYNDTVTGETLSSVSEKSES------YSNEGSSQPEYIDEVRKKAAS 1233

  Fly  1014 VAVVHLANGNGSVQVARRSDQDGAAQGDLGIAGVHNLSQLPLCGV------GGTSPERKTVQDAM 1072
            ..:|     .||.....|..:||.    |.:...:|:  :..|.:      .|::....|..|.|
  Fly  1234 TYLV-----EGSDMPPPRYQKDGT----LPVIYPNNV--VNACTLPHPRHNNGSAAIHMTRDDQM 1287

  Fly  1073 LQEAKAFYIPYRH--TPPNA--VALSSSKQCAVPS---GSELEVIVPPNSLPLVTTMP------- 1123
            | .:|..|||...  .||:.  ..::|.:..:.|.   .:.|:....|  :|:....|       
  Fly  1288 L-ISKGVYIPSPSPAPPPDGSYYNMNSDRYLSYPPMEYPAALDFTAQP--MPMAHLQPMTVTSLA 1349

  Fly  1124 ---GLGVVGGGGSGGGGVGGSSRRSGSLSS---------SSASSSSNGSSKKQFHTNFVRHSNSN 1176
               |..::|.|.......|..:.|.|.|..         :..:|:..||..:..|.         
  Fly  1350 TNGGPTLIGNGSVAAVAGGSGTLRRGILRGVVGVPQPDVTHHTSTVGGSPMQMLHD--------- 1405

  Fly  1177 DGIYLLAEEEAAATLTPTSEREYAAVCLTNGFKLP---ADVAKSGGGTYNTTNNNNSSTNTSQKS 1238
                |.....:|:|||.::        ..|| .||   |.:.:...|.....|.|.......|:.
  Fly  1406 ----LHPVNLSASTLTTST--------TLNG-SLPTATATLPRQPHGILKDPNRNKQQQQQQQQQ 1457

  Fly  1239 ATAKERQPR---------GNGNPISFSHNACKV----PANG--------------PASVNVNHSS 1276
            ...::.|.:         |.|.|:|....:.::    ||:|              |.:|.::...
  Fly  1458 QQQQQLQHQQQLLNASLVGVGVPVSAPLGSLQILNLPPASGGLGNNLLMTTNAFDPTTVGLSSFG 1522

  Fly  1277 AVKQS 1281
            ||.|:
  Fly  1523 AVSQA 1527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_651482.3 Ig 179..245 CDD:409353 20/121 (17%)
Ig strand B 179..183 CDD:409353 2/3 (67%)
Ig strand C 192..196 CDD:409353 0/3 (0%)
Ig strand E 214..218 CDD:409353 1/3 (33%)
Ig strand F 228..233 CDD:409353 2/4 (50%)
Ig strand G 242..245 CDD:409353 1/20 (5%)
IG_like 284..356 CDD:214653 17/92 (18%)
Ig 360..443 CDD:472250 24/90 (27%)
Ig strand B 377..381 CDD:409353 1/3 (33%)
Ig strand C 390..394 CDD:409353 1/3 (33%)
Ig strand E 411..415 CDD:409353 1/3 (33%)
Ig strand F 425..430 CDD:409353 2/4 (50%)
Ig strand G 438..441 CDD:409353 1/2 (50%)
FN3 804..886 CDD:238020 18/94 (19%)
snsNP_001036532.1 Ig 73..170 CDD:472250 6/38 (16%)
Ig strand B 89..93 CDD:409559
Ig strand C 101..105 CDD:409559
Ig strand E 130..138 CDD:409559 2/4 (50%)
Ig strand F 148..153 CDD:409559 2/4 (50%)
Ig 173..279 CDD:472250 21/105 (20%)
Ig strand B 196..200 CDD:409418 2/3 (67%)
Ig strand C 210..214 CDD:409418 0/3 (0%)
Ig strand E 241..245 CDD:409418 1/3 (33%)
Ig strand F 255..260 CDD:409418 2/4 (50%)
Ig strand G 272..275 CDD:409418 0/2 (0%)
Ig_3 285..361 CDD:464046 11/75 (15%)
Ig 377..>457 CDD:472250 15/79 (19%)
Ig strand B 397..401 CDD:409418 2/3 (67%)
Ig strand C 411..415 CDD:409418 0/3 (0%)
Ig strand E 440..444 CDD:409418 1/3 (33%)
Ig 477..560 CDD:472250 21/83 (25%)
Ig strand B 499..504 CDD:409418 1/4 (25%)
Ig strand C 514..518 CDD:409418 1/3 (33%)
Ig strand E 537..541 CDD:409418 1/4 (25%)
Ig strand F 551..556 CDD:409418 2/4 (50%)
Ig 584..666 CDD:472250 16/81 (20%)
Ig strand B 595..599 CDD:409416 1/3 (33%)
Ig strand C 609..613 CDD:409416 0/3 (0%)
Ig strand E 636..642 CDD:409416 2/5 (40%)
Ig strand F 652..657 CDD:409416 1/4 (25%)
Ig strand G 667..670 CDD:409416 0/2 (0%)
Ig 678..767 CDD:472250 21/113 (19%)
Ig strand B 696..700 CDD:409353 0/3 (0%)
Ig strand C 710..714 CDD:409353 2/21 (10%)
Ig strand E 733..737 CDD:409353 1/3 (33%)
Ig strand F 747..752 CDD:409353 0/4 (0%)
Ig_3 772..847 CDD:464046 16/83 (19%)
Ig 881..963 CDD:472250 17/84 (20%)
Ig strand B 885..888 CDD:409353 1/2 (50%)
Ig strand C 897..901 CDD:409353 0/3 (0%)
Ig strand E 929..933 CDD:409353 2/3 (67%)
Ig strand F 943..948 CDD:409353 2/6 (33%)
FN3 967..1051 CDD:238020 19/99 (19%)
Blue background indicates that the domain is not in the aligned region.

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