DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plum and fra

DIOPT Version :10

Sequence 1:NP_651482.3 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_523716.2 Gene:fra / 36377 FlyBaseID:FBgn0011592 Length:1526 Species:Drosophila melanogaster


Alignment Length:1583 Identity:287/1583 - (18%)
Similarity:489/1583 - (30%) Gaps:569/1583 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 DVVVEQVSYRKNDFFIYDNGTLRLPT---NEKASGEYYCKIEWDESAVISDRITVEYPVLKRLFP 163
            |:|:...::|..    ..||:|.:.:   |...:|.|.|.:..:....|..|     |.|..:. 
  Fly    87 DLVIVGDTFRTQ----LKNGSLYISSVEENRGLTGAYQCLLTAEGVGSILSR-----PALVAIV- 141

  Fly   164 GQQQAANISALENKPLVLSCPFLSVPAARFSWYFG--------NDSL---TNDNSALILTNGTLI 217
             :|...|...||...|.....:........:|..|        .|.|   .:....::|.||.|.
  Fly   142 -RQPDLNQDFLETYLLPGQTAYFRCMLGEANWQEGVKHSVQWLKDDLPLPLDKLRMVVLPNGALE 205

  Fly   218 LRHLRLEQAGKYKC----VAQNTFASKTHRQFIWQLQV-EPKDATFYPKNEAGITETAVSEAQLL 277
            :..:.....|.|:|    .:.:..:|||:      |.: :|.|..              :|..:.
  Fly   206 IDEVGPSDRGSYQCNVTSGSSSRLSSKTN------LNIKKPSDPG--------------AENSVA 250

  Fly   278 PAF--QNATVFVPAGGSVLLQCHAVADFVPIVWYLQPPNNKMVR----LSNNSV--AYSIT---N 331
            |:|  ..:...|..|.:|.|.|  ||:.||      .|..|.:|    |..|.:  .:||.   :
  Fly   251 PSFLVGPSPKTVREGDTVTLDC--VANGVP------KPQIKWLRNGMDLDFNDLDSRFSIVGTGS 307

  Fly   332 ASIARHE----GRYSC-----ITPLETQNFQVIVTTPPRIVSRLPVEVVYIGLSRTLTCRAEGHP 387
            ..|:..|    |.|.|     :..|:.| ..|.|..||:.:........:......|.|...|.|
  Fly   308 LQISSAEDIDSGNYQCRASNTVDSLDAQ-ATVQVQEPPKFIKAPKDTTAHEKDEPELKCDIWGKP 371

  Fly   388 EPSITWYHNGVHLN-SSYTRYISGNELHVHSFDSKEEGIYQCVARNVAGEDSATGELRFNRQLEE 451
            :|.|.|..||..:. :.|.:.:.|:.|.:....:.:.|::|||..|.||...|...||...|..:
  Fly   372 KPVIRWLKNGDLITPNDYMQLVDGHNLKILGLLNSDAGMFQCVGTNAAGSVHAAARLRVVPQGVK 436

  Fly   452 VNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRNNP---------HSWTSF---------SP 498
            :   :..:...||..|:. |||:.|         .|..|         .|..||         ..
  Fly   437 I---KKRKSQGHSTKSLQ-TFDNLT---------KRRKPFNSGEQLRTKSGGSFPFPDEDDDLDD 488

  Fly   499 MKLNQTSYVVISTDLPVYEPFALITRVLFPTTEVR-----TGTLVPQQMILSSL--------RST 550
            .....|...:.|..||.:|.         |..:.|     .|:.:|......|.        ...
  Fly   489 NDSGTTRLRIPSGKLPKFEQ---------PLNDRRFNILNAGSALPLDNQSKSYEDDDDDYDEDD 544

  Fly   551 PVTCCTQGLMLRPIAVGNDT---FVKWSQGQLENKKYFILQFS--------INHTHPHP-AQLLN 603
            |    .:..:|.....|.|.   ...|.|.  ::||....:.|        .:.:.||| .:.|:
  Fly   545 P----AKEALLEAYKQGEDAHKILDSWQQS--KSKKSQQQKQSPASPDSPEQDPSVPHPGGKPLD 603

  Fly   604 GSLQGTLTSVEEKADQVRH-------HLTEIQPLNQSAAATV-------LRNVEHEDNVVDDTLE 654
            ..||..|.|  :..|.|..       .|:.::|| |:|...|       :.|.|.|..:|..:  
  Fly   604 SGLQARLPS--QPRDLVAQIVKSRFVTLSWVEPL-QNAGDVVYYTVYYKMNNSEREQKMVTKS-- 663

  Fly   655 LEDDIFSLVVDASVTGILLQRFTRIKMRV------------LIITTENE--FLG--QDFR----- 698
             .||     ...::..:|..|..:.::..            |.::|:.|  ..|  ::|.     
  Fly   664 -HDD-----QQVNIQSLLPGRTYQFRVEANTNFGSGASSAPLEVSTQPEVNIAGPPRNFEGYARS 722

  Fly   699 ----YVQWK--IIENGTSEQSNMPFRLVTRESRALAFKFLDSLNETCV---LECHTE-------- 746
                ||:|:  .:.||    ..:.:|:...|:.:.|..:.||.....|   |..||:        
  Fly   723 HKEIYVKWEEPTVTNG----EILKYRVYYSENDSGADLYHDSTALEAVLTELRPHTDYVISVVPF 783

  Fly   747 -------------IQAQMSLPSQDPKC--------------------QDRN-------------- 764
                         ::...|.||:.|..                    :|||              
  Fly   784 NRNGMGDSSAEIRVKTFSSTPSEPPNNVTLEVTSSSSITVHWEPPAEEDRNGQITGYKIRYRKFK 848

  Fly   765 ----------------IAN-----------SLLLVTGLKPDTRYNLHFYNCKTRIFYGDIDEKTE 802
                            ::|           :.:.|.|..|.|.:|      :......|:||...
  Fly   849 DAPQVKSTPANIRYFELSNLDRNAEYQVKIAAMTVNGSGPFTEWN------RANTLENDLDETQV 907

  Fly   803 QDPPGTISNSKLIKQNGLKLMWEPPINPNGRVHHYDIRWSLDNVTHEAIVKECTKCSYKFPNVSE 867
            ...|..||...  ..|.:.|.|.||.:|..::.:|.:.|.........|..:.|:..:...|:..
  Fly   908 PGKPIWISIHP--GANNIALHWGPPQHPEIKIRNYVLGWGRGIPDENTIELKETERYHILKNLES 970

  Fly   868 TAKIHVAVRVMGDTGAGAPMYFD--------------------------------------MINN 894
            .....|::|.....|.|.|:|.:                                      |:|.
  Fly   971 NMDYVVSLRARNVKGDGPPIYDNIKTRDEEPVDAPTPLEVPVGLRAITMSSSSIVVYWIDTMLNK 1035

  Fly   895 NHTWLKEESESSHSEVYSGIAIGS-------LLSIACV---------FLFGLFIIFQQR--NFKA 941
            |    :..:::.|..|..||. ||       ...:.|:         :.|.:.::..:|  ::..
  Fly  1036 N----QHVTDNRHYTVSYGIT-GSNRYRYHNTTDLNCMINDLRPNTQYEFAVKVVKGRRESSWSM 1095

  Fly   942 RAQGPTHLTTP------TDINFGNLSSASGM-----PGDSAGGLSGGTL---------------- 979
            .....|:...|      ..:....::..:.:     |..:.|.::|..:                
  Fly  1096 SVLNSTYQNVPVTPPREVTVRLDEMNPPTVIVQWIPPKHTLGQITGYNIYYTTDTTKRDRDWSVE 1160

  Fly   980 ----QQDCHEMQTLIPRSRYHIEL----------LPEHSLEYQTSTAAV---------------- 1014
                ::....:..|.|.:.|:.::          .|..:|...|::|||                
  Fly  1161 AFAGEETMLMLPNLKPYTTYYFKVQARTTKGANNAPFSALVSYTTSAAVTMQEPDTIAKGIDNEK 1225

  Fly  1015 ---------AVVHLANGNGSVQVARRSDQDGA-------AQGDLGI------------------- 1044
                     |||.|....|.:.:.||..|...       .:.::|:                   
  Fly  1226 LLYIIIAATAVVLLVVLLGVLLLCRRKPQSSPEHTKKSYQKNNVGVPKPPDLWIHHDQMELKNID 1290

  Fly  1045 AGVHNLSQLPLCGVGGTSPERKTVQDAMLQEAKAFYIPYRHTPPNAVALSSSKQCAVPSGSELEV 1109
            .|:|.::  |:|..|.:|....|:                   |.:|         |.|..|:|.
  Fly  1291 KGLHTVT--PVCSDGASSSGALTL-------------------PRSV---------VHSEYEVET 1325

  Fly  1110 IVP---PNSLPLVTTMPGLGVVGGGGSGGGGVGGSSRRSGSLSSSSASSSSNGSSKK-QFHTNFV 1170
            .||   .|||...:.:||.                           .::|.||:.:: |:.....
  Fly  1326 PVPGHVTNSLDKRSYVPGY---------------------------MTTSMNGTMERPQYPRTQY 1363

  Fly  1171 RHSNSNDGIYLLAE---------EEAAATLTPTSEREYAAVCLTNGFKLPADVAKSGGGTYNTTN 1226
            .|.|.:   ::..|         :..:.::..|.|..|                  ||...|..|
  Fly  1364 SHQNRS---HMTMEAGLSQQSLTQPQSNSMAQTPEHPY------------------GGYDANFCN 1407

  Fly  1227 NNNSSTNTSQKSATAKERQPRGNGNPISFSHNACKVPANGPASVNVNHSSAV-----------KQ 1280
            ..|::......|.....::    |:|:. |.:....|..|.|:....|:.||           |.
  Fly  1408 AGNAAAGNGCVSTIESSKR----GHPLK-SFSVPGPPPTGGATPVTKHTPAVTIRPQNQSPYKKP 1467

  Fly  1281 SWPAAT---------VVHRRAQV 1294
            |:.|||         |||...::
  Fly  1468 SFSAATPNRLQGGGSVVHSTDEI 1490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_651482.3 Ig 179..245 CDD:409353 15/80 (19%)
Ig strand B 179..183 CDD:409353 1/3 (33%)
Ig strand C 192..196 CDD:409353 0/3 (0%)
Ig strand E 214..218 CDD:409353 2/3 (67%)
Ig strand F 228..233 CDD:409353 2/8 (25%)
Ig strand G 242..245 CDD:409353 0/2 (0%)
IG_like 284..356 CDD:214653 24/89 (27%)
Ig 360..443 CDD:472250 21/83 (25%)
Ig strand B 377..381 CDD:409353 1/3 (33%)
Ig strand C 390..394 CDD:409353 1/3 (33%)
Ig strand E 411..415 CDD:409353 1/3 (33%)
Ig strand F 425..430 CDD:409353 2/4 (50%)
Ig strand G 438..441 CDD:409353 1/2 (50%)
FN3 804..886 CDD:238020 18/81 (22%)
fraNP_523716.2 Ig 34..140 CDD:472250 14/61 (23%)
Ig strand B 52..56 CDD:409387
Ig strand C 77..81 CDD:409387
Ig strand E 102..106 CDD:409387 2/3 (67%)
Ig strand F 118..123 CDD:409387 2/4 (50%)
Ig strand G 133..136 CDD:409387 1/7 (14%)
Ig <178..222 CDD:472250 9/43 (21%)
Ig strand C 179..183 CDD:409550 0/3 (0%)
Ig strand E 202..206 CDD:409550 2/3 (67%)
Ig strand F 216..221 CDD:409550 2/4 (50%)
Ig_3 251..327 CDD:464046 23/83 (28%)
Ig 347..428 CDD:472250 20/80 (25%)
Ig strand B 361..365 CDD:409388 1/3 (33%)
Ig strand C 374..378 CDD:409388 1/3 (33%)
Ig strand E 396..400 CDD:409388 1/3 (33%)
Ig strand F 410..415 CDD:409388 2/4 (50%)
Ig strand G 423..426 CDD:409388 1/2 (50%)
FN3 611..703 CDD:238020 18/102 (18%)
FN3 <676..1068 CDD:442628 65/408 (16%)
FN3 1109..1205 CDD:238020 8/95 (8%)
Neogenin_C 1273..1521 CDD:461954 53/301 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.