DRSC/TRiP Functional Genomics Resources

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Protein Alignment plum and Boc

DIOPT Version :9

Sequence 1:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_001101787.2 Gene:Boc / 360715 RGDID:1304550 Length:1110 Species:Rattus norvegicus


Alignment Length:1193 Identity:244/1193 - (20%)
Similarity:393/1193 - (32%) Gaps:379/1193 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GTLRLPT-NEKASGEYYCKIEWDESAVISDRITVEYPVLKRLFPGQQQAANISALENKPLVLSCP 184
            |||.:.. |....|.|.|.......||.|...||....|:......|....:.  |....|::|.
  Rat    84 GTLVIAALNNHTVGRYQCVARMPAGAVASVPATVTLANLQDFKLDVQHVIEVD--EGNTAVIACH 146

  Fly   185 F-LSVPAARFSWYFGNDSL--TNDNSALILTNGTLILRHLRLEQAGKYKCVAQNTFASKTHRQFI 246
            . .|.|.|:..:....:.|  :.|| .||:.:|.|.:.:...|..|.|||.|.|           
  Rat   147 LPESHPKAQVRYSVKQEWLEASRDN-YLIMPSGNLQIVNASQEDEGTYKCAAYN----------- 199

  Fly   247 WQLQVEPKDATFYPKNEAGITETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVADFVPIVWYLQ 311
               .|..:..|....:...:..:....|:::...:..||.|..|.|::|:|  ||..:|      
  Rat   200 ---PVTQEVKTSGSSDRLRVRRSTAEAARIIYPLEAQTVIVTKGQSLILEC--VASGIP------ 253

  Fly   312 PPNNKMVRLSNNSVAYSIT---------NASIARHEGRYSCITPLETQN-------FQVIVTTPP 360
            ||.....:..::..||:.|         :.:.....|.|.|:......:       :.|.|..||
  Rat   254 PPRVTWAKDGSSIAAYNKTRFLLSNLLIDTTSEEDSGTYRCMASNGVGDPGAAVILYNVQVFEPP 318

  Fly   361 RIVSRLPVEVVYIGLSRTLTCRAEGHPEPSITWYHNGVHLNSSYTRYISGNELHVHSFDSKEEGI 425
            .:...|...|:..|.|..|||...|:|.||:.|..|.|.|:|:....:|...|.|.|...::||:
  Rat   319 EVTVELSQLVIPWGQSAKLTCEVRGNPPPSVLWLRNAVPLSSNQRLRLSRKALRVVSVRPEDEGV 383

  Fly   426 YQCVARNVAGEDSATGELRFNRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRNNP 490
            |||:|.|..|...|..:||..|....:.|.:                |::.:.:.          
  Rat   384 YQCMAENAVGSAHAVVQLRTARPDTTLRPGR----------------DTKPIAAT---------- 422

  Fly   491 HSWTSFSPMKLNQTSYVVISTDLPVYEPFALITRVLFPTTEVRTGTL--------VPQQ--MILS 545
               ....|.:.|:       .|..:.|...|:.    |.|.|:..:|        .|.:  :|||
  Rat   423 ---PPMPPSRPNR-------PDQMLREQPGLVK----PPTSVQPTSLKCLGEEQVAPAEAPVILS 473

  Fly   546 SLRSTPVTCCTQGLMLRPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHPAQLLNGSLQGTL 610
            |.|::...  :..|:.||...|:      |:..:   .|::::        |..|:.|.|....:
  Rat   474 SPRTSKTD--SYELVWRPRHEGS------SRAPI---LYYVVK--------HRKQVTNSSDDWII 519

  Fly   611 TSVEEKADQVRHHLT------------EIQPLN-----QSAAATVLRNVEHEDNVV---DDTLEL 655
            :.:  .|:|  ||||            |:...|     |:|..|.......:..:|   :..::.
  Rat   520 SGI--PANQ--HHLTLTRLDPGSLYEVEMAAYNCAGEGQTAMVTFRTGRRPKPEIVASKEQQIQR 580

  Fly   656 EDDIFSL---------------------VVDASVTGILLQRFTRIKMRVLIITTENEFLGQDFRY 699
            :|...||                     :..||.|.:.:....|         ....|..|.||.
  Rat   581 DDPGASLQSSSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPR---------GNGGFPIQSFRV 636

  Fly   700 VQWKIIENG---TSEQSNMPFRL---VTRESRALAFKF----LDSLNETCVLECHTEIQAQMSLP 754
            ...|:.:.|   .:..:..|.||   :|...:.:::||    |:.|.|           ::.|.|
  Rat   637 EYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGE-----------SEPSAP 690

  Fly   755 SQ-------DPKCQDRNIANSLLLVTGLKPDTRYNLH---------------FYNCKTRIFYGDI 797
            |:       ..:..:|.:|...:..|....:|...|.               ||     |:|...
  Rat   691 SRPYVVSGYSGRVYERPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFY-----IYYRPT 750

  Fly   798 DEKTEQDPPGTISNSKLIKQNGLKLMWEPPINPNGRVHH----------YDIRWSLDNVTHEAIV 852
            |...:.|                   ::..:....|..|          |||:....|...|:..
  Rat   751 DSDNDSD-------------------YKKDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEF 796

  Fly   853 KECTKCSYKFPNVS--------------ETAKIHVAVRVMGDTGAGAPMYFDMINNNHTWLKEES 903
            .....|..|....|              :...:....|.|| |||......|:            
  Rat   797 SNVMICETKARKFSGQPGRPPPLTLAPPQPPPLEAMERPMG-TGAMVARASDL------------ 848

  Fly   904 ESSHSEVYSGIAIGSLLSIACVFL-FGLFIIFQQRNFKARAQGPTHLTTPTDINFGN---LSSA- 963
                ..:..|:.:||::.|...|: |.|:..:.::..            .||:.|..   |||: 
  Rat   849 ----PYLIVGVVLGSIVLIIVTFIPFCLWRAWSKQKH------------TTDLGFPRSALLSSSC 897

  Fly   964 -------SGMPGDSAGG---LSG-----------GT--------------LQQDCHEMQTLIPRS 993
                   .|:||..|.|   |||           |:              |||.|          
  Rat   898 QYTMVPLGGLPGHQANGQPYLSGIGGRACVSRLHGSRGYPAATVGCPGRKLQQHC---------- 952

  Fly   994 RYHIELLP-EHSLEYQTSTAAVAVVHLANGNG--SVQVARRSDQDGAAQGD----LGIAGVHNLS 1051
                   | |.:.:.:.|.:.:....::||..  :.||| |..:.|:.:|.    |.....|.|.
  Rat   953 -------PGELAQQREDSNSLLRQPIVSNGYDLQNQQVA-RGTKSGSEEGSFLYTLPDDSTHQLL 1009

  Fly  1052 QLPLCGVGGTSPERKTVQDAMLQE-----AKAFYIPYRHTPPNAV-------ALSSSKQCAV--- 1101
            |...|......|. .|.|.|:.:.     .:|.:.|..|:.|...       .:.||..|.|   
  Rat  1010 QPQDCCHLQKQPV-TTCQTAVRRAPEGPGLEASWDPQYHSGPRCCLGLVPVEEVDSSDSCQVGGG 1073

  Fly  1102 ------PSGS----ELEVIVPPN 1114
                  |||:    ||.|.:.|:
  Rat  1074 DCCPQHPSGTYTGQELGVRLSPS 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_001163744.1 IG_like 170..241 CDD:214653 20/73 (27%)
IGc2 175..235 CDD:197706 19/62 (31%)
IG_like 284..356 CDD:214653 19/87 (22%)
I-set 360..443 CDD:254352 30/82 (37%)
IGc2 378..435 CDD:197706 23/56 (41%)
FN3 804..886 CDD:238020 17/105 (16%)
BocNP_001101787.2 Ig_3 31..104 CDD:372822 7/19 (37%)
IG 132..207 CDD:214652 21/91 (23%)
IGc2 240..301 CDD:197706 15/68 (22%)
I-set 318..401 CDD:369462 30/82 (37%)
ISET-FN3_linker 404..467 CDD:374682 13/102 (13%)
fn3 480..554 CDD:365830 18/96 (19%)
FN3 601..692 CDD:238020 21/110 (19%)
FN3 707..804 CDD:238020 18/120 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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