DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plum and boc

DIOPT Version :9

Sequence 1:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_001005393.1 Gene:boc / 334628 ZFINID:ZDB-GENE-030131-6560 Length:1032 Species:Danio rerio


Alignment Length:1353 Identity:258/1353 - (19%)
Similarity:414/1353 - (30%) Gaps:444/1353 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRLFVIQLIEILLLLLTDHNGRLTLTKESTTVAAAVAQPKNSTALQPYLQIQK--HAVTRLTISK 69
            |::.|:..:.:||..|.|.|              ||.........:|:..:||  .:||      
Zfish    14 RKIRVLCSLCVLLFCLQDSN--------------AVTDDVPVFTEEPFSVVQKLGGSVT------ 58

  Fly    70 PHSPYYLPC--IPILTPYNHDQDNQPIYCSWYRN------------DVVVEQVSYRKNDFFIYDN 120
                  |.|  :|     ||      :..||:.|            .|:|..             
Zfish    59 ------LRCSALP-----NH------VNISWHLNGRELPAGGDEELGVLVRP------------- 93

  Fly   121 GTLRLPT-NEKASGEYYCKIEWDESAVISDRITVEYPVLKRLFPGQQQAANISALENKPLVLSCP 184
            |:|.:|: .....|.|.|.......:..|....|....|:...|..||...:.  |....|:.|.
Zfish    94 GSLYIPSLTNLTVGRYQCVATTSVGSCASVPANVTAAKLRDFEPDDQQEIEVD--EGNTAVIECH 156

  Fly   185 F-LSVPAARFSWYFGNDSL-TNDNSALILTNGTLILRHLRLEQAGKYKCVAQNTFASKTHRQFIW 247
            . .|.|.|:..:....:.| |:..:.||:.:|.|.:.:...:..|.|.|.|.|....        
Zfish   157 LPESQPKAQVRYSVKQEWLETSKGNYLIMPSGNLQIANATRDDEGPYICAAYNPVTQ-------- 213

  Fly   248 QLQVEPKDATFYPKNEAGITETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVADFVP---IVWY 309
                |.|.:|  ..:...|..:....|:::....:.::.|..|..::|:|  ||..:|   :.|.
Zfish   214 ----EIKTST--STDRLRIRRSTSEAARIIYPPASRSIMVNKGQRLVLEC--VASGIPTPQVTWA 270

  Fly   310 -----LQPPNNKMVRLSNNSVAYSITNASIARHEGRYSCITPL---ETQNFQVI----VTTPPRI 362
                 |:..||....|||     .:.:|:.....|.|.|:...   .|.:.||:    |..||::
Zfish   271 KDGLDLRNHNNTRFLLSN-----LLIDAASESDSGTYVCLADNGIGSTSSAQVLYDVQVFEPPQV 330

  Fly   363 VSRLPVEVVYIGLSRTLTCRAEGHPEPSITWYHNGVHLNSSYTRYISGNELHVHSFDSKEEGIYQ 427
            ...|..:.|..|.:...:|:..|.|.|::.|.||...|:.|....:|...|.|.:...:::|:||
Zfish   331 RVELQQQDVAWGDTVRFSCQVRGKPAPTVVWLHNAQPLSPSPRHRVSAQVLRVLNVGPQDDGMYQ 395

  Fly   428 CVARNVAGEDSATGELRF-----NRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVR 487
            |:|.|..|...|...|..     :|::..:.||                                
Zfish   396 CMAENGVGSSQAATRLLTLPTVPSRKMPMIRPL-------------------------------- 428

  Fly   488 NNPHSWTSFSPMKLNQTSYVVISTDLPVYEPFALITRVLFPTTEVRTGTLVPQQMILSSLRSTPV 552
                     ||.|       |:....|:..|.:....:.|..:|||.           |....||
Zfish   429 ---------SPDK-------VLREQPPLKPPVSTSAVLPFDCSEVRV-----------SPAEAPV 466

  Fly   553 TCCTQGLMLRPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHPA--QLLN----GSLQGTLT 611
            ..                    ||.:.....|:.|.:...|....|.  .::.    |...|..|
Zfish   467 IL--------------------SQPRTGKADYYELTWKPRHDGGAPVLEYIIKYRKAGESPGEWT 511

  Fly   612 SVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVDASVTGILLQRF 676
            :......|.:..||::||.:........||...                                
Zfish   512 TNTISGSQHKLILTKLQPASLYEVEMAARNCAG-------------------------------- 544

  Fly   677 TRIKMRVLIITTENEFLGQ----DFRYVQWK-----------IIENGTS--EQSNMPFRLVTRES 724
                            |||    .||..:|:           :::...|  |..:.|...:..|:
Zfish   545 ----------------LGQPAMMTFRTGKWRRGGPIGPPKTPVVQPRLSPPEAPDRPTVSMATET 593

  Fly   725 RALAFKFLDSLNETCVLECHTEIQAQMSLPSQDPKCQDRNIANSLLL--VTGLKPDTRYNLHFYN 787
            .|.. .::...|....::.......::...|.|.:....||..|.|.  ||||:..|.|      
Zfish   594 SAYV-TWIPRGNRGFPIQSFRVEHKKLRKGSGDWEVAVNNIPPSRLSVEVTGLEKGTSY------ 651

  Fly   788 CKTRIFYGDIDEKTEQDPPGTISNSKLIKQNGLKLMWEPPINPNGRVHHYDIRWSLDN--VTHEA 850
             |.|:...::   ....||...|.:..:..:|         .||.|        .:|.  :|:..
Zfish   652 -KFRVLAVNV---LGASPPSAPSKAYTVVGSG---------PPNRR--------PIDGPYITYNE 695

  Fly   851 IVKECT---KCSYKFPNVSETAKIHVAVRVMGDTGAGAPMYFDMINNNHTW-----LKEE----- 902
            .:.|.|   |.:|...|.:.....::..|.. |:...:....|::..:..|     |:.|     
Zfish   696 AINETTIILKWTYTPLNNTPIYGFYIFYRPT-DSDNDSDYKKDVVEGDRYWHSITDLQPETAYDI 759

  Fly   903 -----SESSHSEVYSGIAIGSLLSIACVFLFGLFIIFQQRNFKARAQGPTHLTTPTDINFGNLSS 962
                 :|...||                  ||..:|.:.   |||   |...|||.:       :
Zfish   760 KMQCFNEGGESE------------------FGNVVILET---KAR---PHQRTTPPE-------T 793

  Fly   963 ASG----------MPGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIELLPEHSLEYQTSTAAVAVV 1017
            ||.          .|||....:.|..|......:...||...:.:....:.:|:.:..|.|..| 
Zfish   794 ASSRPEHPGNPVPRPGDLPYLIVGVVLGAFVFIIVAFIPICLWRVWAKQKQTLDMRFPTLAATV- 857

  Fly  1018 HLANGNGSVQVARRSDQDGAAQGDLGIAGVHNLSQLPLCGVGGTSPERKTVQDAMLQEAKAFYIP 1082
                                           :..|..:..:.|.:..|....|..|..:...|.|
Zfish   858 -------------------------------SPCQYTMVPLQGLALGRACPVDPHLSPSHTVYAP 891

  Fly  1083 YRHTPPNAVALSSSKQCA--VPSGS--------ELEVIVP---PNSLPLVTTMPGLGVVGGGGSG 1134
            .....||      .|..|  :|.|.        |.:.::|   ||....:..... ||.|....|
Zfish   892 KAEYIPN------GKHAAQRLPPGHQEDPNYELECDALLPQDLPNQQQNIHNYCN-GVPGCPEEG 949

  Fly  1135 GGGVGGSSRRSGSLSSSSASSSSNGSSKKQFHTNFVRHSNSNDGIYLLAEEEAAATLTPTSEREY 1199
            ......|..|..|||.:...|..:.|..:..||                |||..|.||..|..| 
Zfish   950 FCVSDDSPLRLFSLSDAPLESQDDHSLNECIHT----------------EEELTADLTLLSIAE- 997

  Fly  1200 AAVCLTNGFKLPADVAKSGGGTYNTTNNNNSSTNTSQKSATAKERQPRGNGNP 1252
            |::   |.....|:..:.|     ||.|             .|:.:.:|..:|
Zfish   998 ASI---NRLLQQAEPQQEG-----TTEN-------------TKQLEEQGTHDP 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_001163744.1 IG_like 170..241 CDD:214653 17/72 (24%)
IGc2 175..235 CDD:197706 16/61 (26%)
IG_like 284..356 CDD:214653 21/86 (24%)
I-set 360..443 CDD:254352 24/82 (29%)
IGc2 378..435 CDD:197706 18/56 (32%)
FN3 804..886 CDD:238020 16/86 (19%)
bocNP_001005393.1 Ig_2 40..128 CDD:290606 22/123 (18%)
IG_like 48..128 CDD:214653 21/115 (18%)
IG_like 140..219 CDD:214653 21/92 (23%)
Ig 148..209 CDD:299845 15/60 (25%)
IG_like 242..315 CDD:214653 19/79 (24%)
Ig 243..316 CDD:299845 19/79 (24%)
I-set 328..411 CDD:254352 24/82 (29%)
IGc2 342..403 CDD:197706 19/60 (32%)
ISET-FN3_linker <422..463 CDD:293231 13/99 (13%)
FN3 480..555 CDD:238020 17/122 (14%)
FN3 579..674 CDD:238020 22/105 (21%)
FN3 695..780 CDD:238020 17/103 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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